Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq265 167 3e-36 >seq265 Length=13576 Score = 167 bits (184), Expect = 3e-36 Identities = 384/575 (67%), Gaps = 5/575 (1%) Strand=Plus/Minus Query 37162 ATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCAT 37221 |||| ||||| || || |||| || || | || || |||| | ||||| || | Sbjct 3719 ATTTGAACAACAAGCAACCAAAGTCTGTGTGGAGTCCCTCGTCTCGGCAAATCAACTCGT 3660 Query 37222 TAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAG 37281 | ||||| || ||||| ||||| | ||| | || || | |||||| || || ||||||| Sbjct 3659 TTGAAAATGTCAATCCGGGCATAAGACCACGCTTCTTGAGCCAAAAGATGGCAGCAAAAG 3600 Query 37282 ATCCAGAAAAGAAAATACCTTCAACTGCTGCA-AATGCTACAAGACGTGTACCGAAAGTT 37340 | ||| ||||| || || ||||| | ||| || || | | | |||||| || Sbjct 3599 ACCCACTGAAGAAGATTCCCTCAACAAC-GCAGAAGGCGGCCAATCTCTCTCCGAAACTT 3541 Query 37341 GAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATT 37400 || | ||| ||||||| || ||||| ||||| ||| | |||| || Sbjct 3540 TTGCTGGAGTCATCGATCCATTCCAGTGCCCAATTAGCCTTCTTTTTGATACATGGGATA 3481 Query 37401 GTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATT 37460 || | | ||| || || || |||| | | || ||| ||||| | ||||| |||||||| Sbjct 3480 TTTGCGACTGCGTTAAAAAGGAAGTCTCTCTCCTCATTATCTTTGATATAGGTATCAATC 3421 Query 37461 AGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACAC 37520 | | | |||||||| ||| || ||||| || |||||| || ||||| ||||| Sbjct 3420 AACATAGAGTACATTTCGCTGTGGATGTTTTCTATCATTATCTGGAAGCCATAGAAACAT 3361 Query 37521 CTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATC 37580 ||||| |||| | || || || | ||| | | | || ||||| || ||||| Sbjct 3360 CTAGCCTCAGGGATCTGGACTTCAGTTCCAAAGTTGGCAACCAAATTTTCGTTGACTATT 3301 Query 37581 CCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGAT 37640 |||||||| ||||| || || ||||||| | || |||||| |||||| | || | | Sbjct 3300 CCATCACTGGCTGCGAAAAATGCAAGAATGTTCTTGATAAAAAATCTTTCGTTATCAGTT 3241 Query 37641 AATTTTTT---CCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 | ||| || ||| | | | || | |||||||||||||| || || ||||| || Sbjct 3240 AGTTTATTTTCCCAGTGCTGGGTGTCCTGAGATAAATCAACTTCTTCGACAGTCCAGAAG 3181 Query 37698 CTTGCCAATGCACGTTTATACATCGTCCAAATATC 37732 || || || ||||||||| |||||| || Sbjct 3180 CTGGCTTCGGCCTTTTTATACATTTGCCAAATCTC 3146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592259071323880