Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3671 127 2e-24 >seq3671 Length=8432 Score = 127 bits (140), Expect = 2e-24 Identities = 205/295 (69%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 139246 TTGCTATAGCATGTAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTG 139305 |||||||| | || ||| | | |||||||| |||| || | | |||| ||||||| Sbjct 2505 TTGCTATATTTTTGAGACCAGCGGGGCCATGATACACTGCGTACATTGCAGATATATTTG 2564 Query 139306 CGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCT 139365 |||| || || || || ||||| || || |||||| | |||||||||||||| |||| Sbjct 2565 CGAGAAGAGCCTGGGCAGTGCAAATATTTGAAGTTGCTCTATCTCTTCTAATATGTTGCT 2624 Query 139366 CTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTA 139425 | | || || || || | ||| || |||| |||| |||| | ||| ||| | Sbjct 2625 CACGAGCCTGGAGGGCAAGTCTATAGGCAGTTCGACCTTTTGTGTCTATTGAAACACCAA 2684 Query 139426 CAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAG 139485 ||| | ||| || || ||||||||| || | ||||| | ||| |||||||| | Sbjct 2685 CAAGACGGCCTGGGATTTTTCTCTTAAGGGCATCGGAAGTTGCGATGAAGGCAGCATGTG 2744 Query 139486 GACCTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540 |||| || || || | || || ||||||||| || | | |||| || ||||| Sbjct 2745 GACCACCATAGCCTAGAGAAACACCAAACCTCTGAGAATTTCCTATTGCTATATC 2799 Score = 89.7 bits (98), Expect = 6e-13 Identities = 165/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 138171 AGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAG 138230 || ||||| ||||| ||| ||||| || || || ||||| |||||||| |||| || Sbjct 1391 AGGTGTTTCTTTACACAAATTGGACCAACTCCGGGTCCTCCTCCTCCATGAGGAACGCAT 1450 Query 138231 AATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGA 138290 | || ||||| || | || || |||||||| || ||| | ||| || | || Sbjct 1451 AGTGATTTATGGTTGTTAATGTGGCAAACATCTGCTCCCATGTCTCCTGGATTGGTTATT 1510 Query 138291 CCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACG 138350 |||| || ||||| | ||||||||||| | || || || || || ||||| || || Sbjct 1511 CCTATTTGGGCATTCAAGTTTGCACCATCCATGTAAACTTGGCCTCCGTTGTCGTGGACT 1570 Query 138351 ATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATC 138410 |||| | | | |||| | |||||| | ||||| ||| || || || || ||| Sbjct 1571 ATCTGGATTGCTTCTTTGATTCCTTCTTCAAAAATACCATAAGTAGAAGGGTAAGTGATC 1630 Query 138411 AT 138412 || Sbjct 1631 AT 1632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578941969368440