Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq356 113 4e-20 >seq356 Length=31527 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| |||||||| ||||| ||||| || || ||||| ||| |||| ||| || | Sbjct 30912 ATGCAGATTTTTGTTAAAACCTTAACCGGTAAGACCATCACCCTCGAGGTTGAGTCTTCC 30971 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||| || ||| | || || |||||||| ||||| ||||| | ||| |||||| Sbjct 30972 GATTCTATCGAAAACGTCAAGCAAAAGATCCAGGATAAGGAAGGAATCCCCCCAGATCAG 31031 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || |||||||| | || ||||| || |||| || | || | | ||||||||| Sbjct 31032 CAAAGACTTATCTTCGCCGGTAAGCAATTGGAAGATGGACGTACTCTTTCTGACTACAAC 31091 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || ||||| ||||| | ||| |||| |||||| | || || || Sbjct 31092 ATCCAGAAGGAATCTACCCTCCACTTGGTTTTGAGACTCCGTGGTGG 31138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398838896358133