Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq356 86.0 5e-12 >seq356 Length=31527 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| |||||||||||||| || || || |||||||| ||| | || || | | Sbjct 30912 ATGCAGATTTTTGTTAAAACCTTAACCGGTAAGACCATCACCCTCGAGGTTGAGTCTTCC 30971 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 |||||| | | | || || ||||| || || || ||||| | ||| ||||| Sbjct 30972 GATTCTATCGAAAACGTCAAGCAAAAGATCCAGGATAAGGAAGGAATCCCCCCAGATCAG 31031 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| ||||| | || || || ||||| |||||| ||| | || |||||| Sbjct 31032 CAAAGACTTATCTTCGCCGGTAAGCAATTGGAAGATGGACGTACTCTTTCTGACTACAAC 31091 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAG 106474 || || || |||||||| || || || || ||||| Sbjct 31092 ATCCAGAAGGAATCTACCCTCCACTTGGTTTTGAG 31126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402291368252576