Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq872 91.5 1e-13 seq356 89.7 5e-13 seq2250 84.2 2e-11 >seq872 Length=30969 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||||| | || || ||||| || || ||||| | | Sbjct 26047 CCACCACGAAGACGGAGGACCAAATGAAGAGTGGATTCTTTTTGGATATTATAATCAGAC 26106 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || |||| ||||||||| ||||| ||||| || ||||| || | || Sbjct 26107 AAAGTACGGCCATCCTCCAACTGCTTACCGGCAAAGATCAAACGTTGCTGATCTGGGGGG 26166 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| || ||| || ||||| | | || | | | ||| || || ||| Sbjct 26167 ATTCCTTCCTTATCTTGGATTTTCTGCTTAACATTTTCGATGGAATCGGAAGACTCGACC 26226 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCT 35739 || | || || || ||||| || | ||||| ||||| ||||||||||| Sbjct 26227 TCGAGGGTAATGGTCTTACCAGTTAGTGTTTTGACAAAAATCTGCATTCT 26276 >seq356 Length=31527 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | ||||| ||||| || | ||| ||||| || |||||||| || | Sbjct 31138 CCACCACGGAGTCTCAAAACCAAGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCAGAA 31079 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || |||| |||||||| || || || | | ||||| || | || Sbjct 31078 AGAGTACGTCCATCTTCCAATTGCTTACCGGCGAAGATAAGTCTTTGCTGATCTGGGGGG 31019 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||||||||| | || | | | ||| || || ||| Sbjct 31018 ATTCCTTCCTTATCCTGGATCTTTTGCTTGACGTTTTCGATAGAATCGGAAGACTCAACC 30959 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || ||||| || || ||||| ||||| |||||||| Sbjct 30958 TCGAGGGTGATGGTCTTACCGGTTAAGGTTTTAACAAAAATCTGCAT 30912 >seq2250 Length=3934 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 ||| ||||| || | ||| ||||| || ||||||||||| | || || || | || Sbjct 108 CAATACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAGTACGGCCATC 167 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || || || ||||| || || || | ||||||||||| | || | | ||||| || Sbjct 168 TTCAAGTTGTTTACCAGCGAAAATAAGACGCTGCTGGTCTGGTGGGATTCCTTCCTTATC 227 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | ||||| ||||| | | | | | ||||| ||||| ||||| | || || || Sbjct 228 CTGAATCTTCTGCTTGACATTGTCAATAGTGTCAGAAGATTCTACCTCAAGGGTAATTGT 287 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 ||||| || | ||| || || || ||||||||| Sbjct 288 CTTACCAGTTAGAGTCTTAACGAAAATCTGCATT 321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450749664528760