Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2250 87.8 2e-12 >seq2250 Length=3934 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/228 (69%), Gaps = 5/228 (2%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTC 27091 ||||||||||| || | ||||| || || || || ||||| || | | | | | || | Sbjct 106 CGCAATACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAG-TACGGCC 164 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 ||||| || |||||||| ||| |||| |||||||| || || || || | || || || Sbjct 165 ATCTTCAAGTTGTTTACCAGCGAAAATAAGACGCTGCTGGTCTGGTGGGATTCCTTCCTT 224 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 ||| ||||| | || | | || | |||||| | | ||| || || || || || Sbjct 225 ATCCTGAATCTTCTGCTTGACATTGTCAATAGTGTCAGAAGATTCTACCTCAAGGGTAAT 284 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCTAAAAA 27259 | || || || ||||| || || || || ||||| ||||||||| Sbjct 285 TGTCTTACCAGTTAGAGTCTTAACGAAAATCTGCAT---TGCTAAAAA 329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424894020210264