Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq265 107 2e-18 >seq265 Length=13576 Score = 107 bits (118), Expect = 2e-18 Identities = 216/314 (69%), Gaps = 5/314 (2%) Strand=Plus/Plus Query 94821 TGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGA 94879 ||||| ||||||||| ||||||||| ||| || || ||| || || | ||||||||||| Sbjct 3569 TGCGT-TGTTGAGGGAATCTTCTTCAGTGGGTCTTT-TGCTGCCATCTTTTGGCTCAAGA 3626 Query 94880 AGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGAC 94939 |||| ||||| ||||| || | || || |||||| | || | || |||||||||| Sbjct 3627 AGCGTGGTCTTATGCCCGGATTGACATTTTCAAACGAGTTGATTTGCCGAGACGAGGGAC 3686 Query 94940 TCCACCAAGAGTTTGCGGTGGAACTT-TTCAAATTATTGCGTATTAAACCAACGACTGAG 94998 ||||| ||| |||| | || || ||||||| | || || || | || Sbjct 3687 TCCACACAGACTTTG-GTTGCTTGTTGTTCAAATGCCTTGTTAACAAGCCCAGCCAGGAA 3745 Query 94999 ACTATTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAGAAAGGATTCATATTGGATGCC 95058 ||||||| || || || | || || || | ||||||| ||| || || || || Sbjct 3746 ACTATTCTATCCATCGTCACTGATGCTGTCGTGATTGAGCAAGAGTTTTTAACCGACTCC 3805 Query 95059 CTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAAATGTCTGAATATATTGAGTATGTA 95118 || || ||| |||| || |||||||| || |||| ||||||| |||| ||| Sbjct 3806 CTCCCCTGCTCTCTGATTGGTATGAACAGTGTCCTGATGTGCCAATATATCGAGTTCGTA 3865 Query 95119 TCTGATAGATTGTT 95132 | ||| | ||||| Sbjct 3866 GCCGATCGTTTGTT 3879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583203953944280