Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq1527 87.8 2e-12 >seq1527 Length=7868 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/153 (75%), Gaps = 5/153 (3%) Strand=Plus/Plus Query 89244 ATTATCGCGCCACTAACGGCTAATACTCTAGCGAAGATAGCTAATGGTATATGCGACAAC 89303 ||||| || || || ||||| ||||| || || ||||||||||| |||||||||| Sbjct 1013 ATTATTGCTCCGCTTGATGCTAACACTCTTGCTAAAATAGCTAATGGCCTATGCGACAAT 1072 Query 89304 TTACTAACTTCTATAGTTAGGGCATGGGATATATCAAAGCCCCTTATT-TTTTGTCCTGC 89362 || || |||| |||| || | || |||||| | ||| || |||| ||||||| || Sbjct 1073 TTGCTCACTTGTATAATTCGTGCTTGGGAT-CCTAAAAATCCTATATTCGTTTGTCCCGC 1131 Query 89363 CATGAATACTCTA-ATGTGGGAACATCCTATTA 89394 |||||| || ||| |||| |||||||| |||| Sbjct 1132 CATGAACAC-CTACATGTACGAACATCC-ATTA 1162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603122012491280