Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq872 95.1 9e-15 >seq872 Length=30969 Score = 95.1 bits (104), Expect = 9e-15 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 27786 TAAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAG 27845 || |||||| |||||||| ||||| || ||||| || ||||| | || ||||| Sbjct 26277 TAGAATGCAGATTTTTGTCAAAACACTAACTGGTAAGACCATTACCCTCGAGGTCGAGTC 26218 Query 27846 CACCGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATG 27903 |||| | || | ||| || || || ||||| || || ||||| | || Sbjct 26217 TTCCGATTCCATCGAAAAT--GTTAAGCAGAAAATCCAAGATAAGGAAGGAATCCCCCCA 26160 Query 27904 GAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGAT 27963 || |||||||| || || |||||||| || || ||||| || | || | ||||| ||| Sbjct 26159 GATCAGCAACGTTTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGTACTTTGTCTGAT 26100 Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || || ||||||||||| |||| | |||||||| | ||| | ||||| || Sbjct 26099 TATAATATCCAAAAAGAATCCACTCTTCATTTGGTCCTCCGTCTTCGTGGTGG 26047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355828583841819