Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq872 91.5 1e-13 seq356 86.0 5e-12 >seq872 Length=30969 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| |||||||||||||| | || || || ||||||||| | || || | Sbjct 26274 AATGCAGATTTTTGTCAAAACACTAACTGGTAAGACCATTACCCTCGAGGTCGAGTCTTC 26215 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 |||||| | | | || || || ||||| || || ||||| | ||| ||||| Sbjct 26214 CGATTCCATCGAAAATGTTAAGCAGAAAATCCAAGATAAGGAAGGAATCCCCCCAGATCA 26155 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||| | | || | ||| || || || ||||| ||| ||| || | |||||||| Sbjct 26154 GCAACGTTTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGTACTTTGTCTGATTATAA 26095 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||| ||||||||||| || || ||||| || | ||||| || ||||| Sbjct 26094 TATCCAAAAAGAATCCACTCTTCATTTGGTCCTCCGTCTTCGTGGTGG 26047 >seq356 Length=31527 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| |||||||| ||||| || ||||| || ||||| ||| | || || | | Sbjct 30912 ATGCAGATTTTTGTTAAAACCTTAACCGGTAAGACCATCACCCTCGAGGTTGAGTCTTCC 30971 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 |||||| | | | || || ||||| || || || ||||| | ||| ||||| Sbjct 30972 GATTCTATCGAAAACGTCAAGCAAAAGATCCAGGATAAGGAAGGAATCCCCCCAGATCAG 31031 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| ||||| | || || || |||||||||||| ||| | | || || || Sbjct 31032 CAAAGACTTATCTTCGCCGGTAAGCAATTGGAAGATGGACGTACTCTTTCTGACTACAAC 31091 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || |||||||| || || || || ||| | || || ||||| Sbjct 31092 ATCCAGAAGGAATCTACCCTCCACTTGGTTTTGAGACTCCGTGGTGG 31138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421771116995272