Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Syncephalastrum_20racemosum_20[genbank_20GCA_5F002105135.1_202017-
04-20] 49 sequences; 30,745,403 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq47 125 1e-23
>seq47
Length=1968370
Score = 125 bits (138), Expect = 1e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | ||||| | |||||||| |||||||| ||||| | ||| || |
Sbjct 80836 ATGCAAATTTTTGTCAAGACCTTGACAGGCAAGACTATAACATTAGAGGTCGAATCATCT 80777
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || |||| | ||| || || || ||||||||||| || || ||||| |||
Sbjct 80776 GATACGATCGATAATGTGAAAGCCAAGATCCAGGATAAAGAAGGCATTCCGCCTGACCAA 80717
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | ||||| ||||| || || || | ||||| | || || || || || |||
Sbjct 80716 CAGCGTCTTATCTTTGCGGGCAAGCAGCTCGAGGACGGACGGACTTTGTCGGACTACAAT 80657
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765
|||||||| || || || |||||||||| | ||| | || || ||
Sbjct 80656 ATTCAAAAGGAGTCCACGCTGCATTTGGTCCTGCGTCTGCGTGGCGG 80610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455537283200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |