Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syncephalastrum_20racemosum_20[genbank_20GCA_5F002105135.1_202017- 04-20] 49 sequences; 30,745,403 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq47 461 7e-125 seq45 149 6e-31 seq49 132 4e-26 seq23 122 8e-23 >seq47 Length=1968370 Score = 461 bits (510), Expect = 7e-125 Identities = 1258/1904 (66%), Gaps = 45/1904 (2%) Strand=Plus/Plus Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168 || || || |||| ||||| | | | || || ||||| ||||| |||||||| ||| Sbjct 705101 TCAACGGTGAACTTGATGGCATCTACTGCAGGGCGAGTGCGGAGATAGTACATGCCTGTC 705160 Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAG 22228 || |||||| ||||||| | ||||| || || ||||| ||| ||| | | || | Sbjct 705161 TTGAGACCCTTCTTCCAGCCATAAAAGTGCATACTCGTCAGTTTGCCAAAGTTGGGTTCG 705220 Query 22229 TCCATGTACACATTGAACGACT--GACTCTGATCGATAAACGCTCCTCGATCGGCGGCCA 22286 | || | | || | |||| | ||||| || ||||| || || || || || |||| Sbjct 705221 CCAATAAAGATGTTTA--GACTTTGGCTCTGGTCAATAAAGGCGCCGCGGTCAGCTGCCA 705278 Query 22287 TATTTATCA-ATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCT 22345 | | || | ||| ||| ||| | |||||||||||||||||| || ||| || | Sbjct 705279 TGTCAATGATATG-ACGTTGCGAGAGTTCCCATACGGTCTTGTAGAGGGCTTTGAGCTTT 705337 Query 22346 AACGGTATCGATT--CGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTT-- 22401 || || ||| ||| | ||||| ||| || || | | ||||||| || || Sbjct 705338 TCGGGGAT--ATTAGGGATGCGCTGGATGGAGCCATTGTCGGACATGATCATGTTCTTGA 705395 Query 22402 AATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGAC-GGTTCACCA 22460 |||| |||||||||| || ||| | || ||| |||| || | || |||| || | Sbjct 705396 CATCG--TCGTTCCACAGGCCCATGTCAACCAGATCCTTGAGCA-ACCACGGGTTAACGA 705452 Query 22461 CTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAG 22520 ||| || || |||| ||| ||||| || ||| | |||||| ||| | |||||||| Sbjct 705453 TTTGGAATTCACCGGCCAAAACGCGACGGGTGTACAGGTTGGACGTGTAAGGTTCGAAGC 705512 Query 22521 ATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCG 22580 |||||||| ||||| ||||| | || || || |||||||| || |||| ||| |||| Sbjct 705513 ATTCATTGAAGCCCAGAATCTGCGAAGTTGAGGCAGTCGGCATGGGTGCCACCAGCAGCG 705572 Query 22581 AGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGG 22640 |||| | |||||| || | ||| || |||||| | ||||||||| ||||||| Sbjct 705573 AGTTACGCAAGCCAGTCTGCGCAATCTTGGCCTTGAGGGCAGCCCAGTCCCATAGATCGG 705632 Query 22641 ACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTT 22700 || ||||| || ||| | || || ||||| ||||| ||| ||||| |||| Sbjct 705633 TGGGTGTCAC---GTTCCAGAAGTCATACTGCAAGACGCCCTTGGACGCTGGGCTACCTT 705689 Query 22701 CGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGT 22760 |||| || |||| ||||| | | | || || ||| | ||||||| ||| | | Sbjct 705690 CGTAAGTCGCGTAGGGACCGTTCAGGACCGCGAGCTCGTTGGAAGCCTCCAGAGCGGCAT 705749 Query 22761 AATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCTTTCGTAC 22816 || || ||||| ||||| | |||| | || ||| ||||| || | Sbjct 705750 GGTAGATGGTCTCAAAGATCTGACTGTTGAGTTTCTTGGCCTCGGGCGA----GTCAAAT 705805 Query 22817 GGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGG 22876 || ||||||| || || || || || | ||| | || |||| |||||| || || Sbjct 705806 GGGTAGCGCATCAACATAAAGGCATCGGCAAGACCGTTGACACCTAGACCGATGGGACGA 705865 Query 22877 TTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTG 22936 | || || || | || || |||| |||||| | || ||||| | || Sbjct 705866 TGACGCATGTTTGAGCGCTCAGCTTCAGGCACAGGATAGTAGTTGATGTCGATAATCTTG 705925 Query 22937 TTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAAC-GCC 22995 || ||||| | ||||||| || | | || || | || | Sbjct 705926 TTTAAGTTGCGCGTCACAACCTTGACAACATCGTGCAACTTTTGGAAATCAAACACTTCG 705985 Query 22996 CGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTC 23055 ||||| | ||||| || | || | ||| | ||||||||| || || ||||| Sbjct 705986 CGATTCT-TGACAAAGGTGGGCAAAGCCAGACTGGCCAAATTGCATACAGCTACTTCGTC 706044 Query 23056 TTTGGAC--GTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAA 23113 |||| | |||||| || || || ||||| |||||||| ||||| ||||||||||| Sbjct 706045 --CGGACTGGAGTACTCGACGATCTCTGTACAGAGATTGCTGCACTTGATCGTGCCCAAG 706102 Query 23114 TTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTC 23173 || |||||| ||| || || |||| |||||||| |||||| | || || ||| Sbjct 706103 TTCTGCTGGTTTGATTTGCGGTTACACGCGTCCTTGTACAGCATGAAGGGGCCACCTGTC 706162 Query 23174 TCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAG-CGTGAACACGTCGCACGTA 23232 ||| || | ||| | ||| || ||| | |||| | | ||| || | || || Sbjct 706163 TCGGTTTGTGCCTCCAAGATGGCATACCAGAGCTTCTGTGCCTTGACAACTTGGCGCG-C 706221 Query 23233 CCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAA-TTC-GGCACCGTAACAGTCG 23290 | ||||| ||||| | ||||||| | | ||||| ||| || || | | ||| Sbjct 706222 GCGACCTTCACGTTCGTATTGATGGTACAGCTCCTCAAACTTCTCGCCCCACACC--TCG 706279 Query 23291 GCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATT---TTCAACG 23347 || || || | || | || || | | ||| |||| | |||| ||| || Sbjct 706280 TGAAGACCTGGTGCTTCGCTTGGGCAGAACAAGCTC--CATTCA-CCATTCTCTTCGACA 706336 Query 23348 CGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCC 23407 || |||| |||||||| || ||||||| || |||||||| || || ||||| |||| Sbjct 706337 CGCTTCATGAAAAGATCAGGGATCCATAAGGCATAGAACAGGTCACGCGCGCGATTCTCC 706396 Query 23408 TCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCG 23467 || |||||||||||||| | |||| || ||||| |||| ||||| |||||| Sbjct 706397 TCCTTGCCGGTGTTCTTGCGGAGGTCCAGGAACGAGAACACATCCGGGTGCCAGGGCTCG 706456 Query 23468 AGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTG 23527 ||||| | ||| || || ||||| | ||| ||||| || |||||||| || || |||||| Sbjct 706457 AGGTAGATGGCGAAAGCACCCGGGCGCTTGTTGCCACCTTGATCGACATAGCGAGCCGTG 706516 Query 23528 TTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACA 23587 || ||||| || | ||||| ||||||| |||||||| || || || | Sbjct 706517 TTATTGTAAACGCGGAGCATAGGCACGATGCCGTTGGAATAACCATTGGTACCAGCGATG 706576 Query 23588 CTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGAT 23647 ||| || || || | | ||| | || || ||| ||||| || | | || || Sbjct 706577 TACGAGCCGGAAGCCCGGATCTGGTGGATGTTGAGACCGATGCCACCCGCGGTCTTGGAA 706636 Query 23648 ATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCG 23707 || | ||| ||||||||| || |||||||| || || ||||| || | | Sbjct 706637 ATTTGGGAGCAAATTTTCAGAGTTTCATAGATGCCTTCAATCGAATCCTCCTTCATGGTC 706696 Query 23708 ACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTG 23767 | ||| || || || |||| |||| || ||| |||| |||||| || || || Sbjct 706697 AACAAAAAGCAGGACGACAGCTGCGGACGAGGGGTACCGGCGTTGAACAGGGTGGGACTC 706756 Query 23768 GCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCC 23827 ||||| ||||||||| | ||||| || ||||| || || |||||| | || || ||| Sbjct 706757 GCGTGGGTAAAGTATTTCTCAGACATGAGGTTGTAAGTCTCAATGGCGCCTTCGATATCC 706816 Query 23828 TCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACG 23887 || ||||| ||||| | || || ||||||| ||||| || |||| |||| | | | Sbjct 706817 TCGCCGTGAATACCCACAGCCACACGCATCAACATGTGCTGCGGTCGCTCGGCAATCTTG 706876 Query 23888 CCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTA 23947 ||||| | || | || ||| | ||||| || ||| || || ||||| |||| ||| Sbjct 706877 CCGTTGAGCTTCAGCAAATAAGCACGTTCCAGCGTCTTGAAGCCAAAGTAGTTGTAGCCG 706936 Query 23948 AAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATT 23991 || || ||||||| | ||||| || || | ||| | ||||| Sbjct 706937 AAATCGCGATCGTAGATGATGGCTGAGTTAAGACGCTCTGCATT 706980 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||||||||| ||||| || || || | || |||||| |||| Sbjct 81064 ATGCAGATCTTTGTGAAGACTCTGACCGGCAAGACTATTACGTTGGAAGTTGAATCGTCT 81005 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || |||||||||||| | || || || ||| Sbjct 81004 GACACAATCGACAATGTCAAGGCCAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAG 80945 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||| ||| | || ||| | ||| | || || ||| Sbjct 80944 CAGCGTCTGATCTTTGCGGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCGGACTACAAC 80885 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||||| |||||||| || ||| |||| || Sbjct 80884 ATTCAAAAGGAATCGACGCTGCATTTGGTGCT 80853 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || || || || || ||| | || || || | || Sbjct 81293 CATGCAGATCTTCGTCAAGACACTTACCGGAAAGACTATAACCCTTGAAGTCGAGTCCTC 81234 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | ||||| | || ||||||||||||| | ||||| ||||| Sbjct 81233 TGACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCA 81174 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || || |||||||| | || ||| | || | ||||| || Sbjct 81173 GCAGCGTCTGATCTTTGCCGGCAAACAACTCGAGGACGGTCGCACCCTCTCGGATTACAA 81114 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||| || |||||||| || ||||| || ||| | || | || |||| Sbjct 81113 CATTCAGAAGGAATCGACCCTCCATCTCGTGCTTCGTCTCCGTGGTGGTA 81064 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| || ||||| |||||||||| || || || | || || ||| | || Sbjct 80837 CATGCAAATTTTTGTCAAGACCTTGACAGGCAAGACTATAACATTAGAGGTCGAATCATC 80778 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||| | || ||| | || ||| || |||||| | ||||| ||||| Sbjct 80777 TGATACGATCGATAATGTGAAAGCCAAGATCCAGGATAAAGAAGGCATTCCGCCTGACCA 80718 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||| || || || ||||| ||| | || ||| |||| || || || || Sbjct 80717 ACAGCGTCTTATCTTTGCGGGCAAGCAGCTCGAGGACGGACGGACTTTGTCGGACTACAA 80658 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTAG 31422 |||||||| || || || || ||| |||| || | ||| | ||||| || Sbjct 80657 TATTCAAAAGGAGTCCACGCTGCATTTGGTCCTGCGTCTGCGTGGCGGAAG 80607 >seq45 Length=2374188 Score = 149 bits (164), Expect = 6e-31 Identities = 283/415 (68%), Gaps = 4/415 (1%) Strand=Plus/Plus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || || || || || || ||||| ||||| || ||| ||||| | || |||||| | Sbjct 1436188 GCTTTTGCTGCTGTGGAGGGTATCTTCTTCTCTGGCTCGTTTGCCTCCATCTTTTGGCTC 1436247 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || || |||||||| || ||||| || ||||||||| | || ||||| ||||| Sbjct 1436248 AAGAAGCGTGGTCTGATGCCTGGTCTGACTTTCAGCAACGAGCTCATCTCGCGTGACGAA 1436307 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGG 58160 |||||||| || || ||||| || || | | ||| || | ||| | || | Sbjct 1436308 GGTCTCCACACCGACTTTGCTTGTCTCCTTTTCTCGCATCTCCGCAAGCAGCCTCCATCT 1436367 Query 58161 GATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAA 58220 || || || | | || ||| |||||| |||| ||||||||| ||||| | ||| Sbjct 1436368 GAGCGTGTCCTCGGTATCATCCGCGAGGCAGTCGAGATCGAAAAGGAGTTCCTGACCACC 1436427 Query 58221 GCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTT 58280 || | || || || || |||| |||||| | | |||| | |||||||||||| Sbjct 1436428 GCTTTGCCCGTCGCTCTGATCGGCATGAACGCGACTCTCATGTGCCAATACATTGAGTTT 1436487 Query 58281 GTTGCCGACAGACT--TTTGCTCGAACTGATTGGAGAGCGTCATTACAACACGAAAAATC 58338 || || ||| | || | |||| | | | || | || ||||| | | || | Sbjct 1436488 GTCGCTGACCGTCTCCTCGTCTCGCTCGGCATCGACAAGTTC--TACAAGGCTACCAACC 1436545 Query 58339 CGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 | || || |||||| | ||||||| ||| |||||||||| ||||| || || || Sbjct 1436546 CCTTCGACTTTATGGACATGATCTCTCTCCAGGGCAAGACCAACTTCTTTGAGAA 1436600 >seq49 Length=1681262 Score = 132 bits (146), Expect = 4e-26 Identities = 145/190 (76%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 22144 GGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGA 22203 ||| ||||| ||||||||||||||||| |||||| ||||||| | |||||| || ||||| Sbjct 828105 GGTTCGAAGGTAATACATGCCCGTCTTGAGACCCTTCTTCCAAGAGTAAAAGTGCATCGA 828164 Query 22204 CGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGAT 22263 ||||| | ||||| | ||| | | | | ||| ||| |||||||| ||| ||||| Sbjct 828165 CGTCAGTCGGCCATAGTTTGGCTCGGCAACGAACAGATTCAACGACTGGGACTGGTCGAT 828224 Query 22264 AAACGCTCCTCGATCGGCGGCCATATTTATCAATG-TACGCATCGACATTTCCCATACGG 22322 || || | || ||||||||||| | || |||| |||| |||| |||||| || | Sbjct 828225 GAAAGCAGCACGGTCGGCGGCCATGTCAAT-AATGACACGCTGAGACAGTTCCCACACTG 828283 Query 22323 TCTTGTACAG 22332 |||||||||| Sbjct 828284 TCTTGTACAG 828293 Score = 91.5 bits (100), Expect = 1e-13 Identities = 246/376 (65%), Gaps = 8/376 (2%) Strand=Plus/Plus Query 23512 GACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCC 23571 |||| |||| || |||| ||||| || | | ||| || |||| ||||| || | ||| Sbjct 829811 GACGAAACGCGCGGTGTCATTGTAGACACGCAACATGGGGACGATGCCGTTCGAGGTGCC 829870 Query 23572 GCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCC 23631 | ||| || | | || ||| || |||| || || | | | | || | ||| Sbjct 829871 GTTGGTGCCGGCAATATATGAGCCTGAAGCGCGAATCTTTTGGAAGCTGCAGCCCACGCC 829930 Query 23632 TCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCT 23691 ||| | || || || || ||||| ||| || || |||||||||||||| || Sbjct 829931 ACCGGCTGACTTGGAAATACGAGCGCAGGTGGTCAAGGTATCATAGATGCCCTCGATACT 829990 Query 23692 GTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTG----CGCTTTGGGCGTAGCGG 23747 ||| ||| | || ||| | | || || | || || |||| || | | Sbjct 829991 GTCATCTCTCATCTGGACGAGATAGCAGCTGGAGAGCTGAGGACGGTTTG----TACCAG 830046 Query 23748 CCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGT 23807 | ||| || || || | ||||| || || ||| | ||||| | | |||| || | Sbjct 830047 CGTTGAAGAGGGTTGGTGTCGCGTGTGTGAAATATTTTTGGGACATGAAACTGTATGTCT 830106 Query 23808 CGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATT 23867 |||| || ||||||||||| ||||| || |||| |||||||||||| ||||||| | Sbjct 830107 CGATAGCCGCATCAATGTCTGTGCCGTGGATGCCGAGGGCGACGCGCATGATCATGTGCT 830166 Query 23868 GAGGTCTCTCGACCGT 23883 | || | ||||||||| Sbjct 830167 GGGGACGCTCGACCGT 830182 >seq23 Length=2864373 Score = 122 bits (134), Expect = 8e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||||||||| |||||||| ||||| || || ||||| || ||||| | || || || Sbjct 1571339 CAAACATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAAGTCGAGT 1571398 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | |||||| | |||| | ||||| |||| || |||||||| ||| | || || | Sbjct 1571399 CTTCCGACTCTATCGAGAACGTCAAGCAGAAGATTCAAGACAAGGAGGGCATTCCTCCGG 1571458 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 | |||||||| || || || |||||||| ||||||||||| || | ||||| Sbjct 1571459 ATCAGCAGCGCCTCATCTTTGCTGGCAAGCAGTTGGAAGATGGCCGCACCCTCTCCGATT 1571518 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | ||||| || || || || ||||| ||||| || || Sbjct 1571519 ACAACATCCAGAAGGAGTCCACTCTCCATCTTGTGCT 1571555 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| |||| ||||| || |||||| |||| ||||| ||||| Sbjct 1571572 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACTATCACCCTCGAGGTTGAGTCGTCC 1571631 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| | || | ||||| |||| || |||||||| ||| | || || |||||| Sbjct 1571632 GACTCGATTGAGAACGTCAAGCAGAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAG 1571691 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || |||||||| ||| | || || ||| | ||||| ||| Sbjct 1571692 CAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCTGATTACAAC 1571751 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||| ||||| || ||||| |||| || | ||| | || |||| Sbjct 1571752 ATTCAAAAGGAATCCACCCTTCACTTGGTTCTCCGCCTGCGTGGTGGTA 1571800 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| |||| ||||| || |||||| |||| ||||| | || Sbjct 1571800 ATGCAGATTTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAAGTTGAGTCATCT 1571859 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| | |||||| || || |||| || |||||||| || | || || |||||| Sbjct 1571860 GACTCTATCGAAAATGTGAAGCAGAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAG 1571919 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||| ||| | ||||| ||| | || || ||| Sbjct 1571920 CAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAAGATGGCCGCACTCTCTCTGACTACAAC 1571979 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || ||||| ||| |||| || | ||| | || |||| Sbjct 1571980 ATCCAGAAGGAGTCTACTCTGCATTTGGTTCTCCGCCTGCGTGGTGGTA 1572028 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| ||||| || |||||| |||| ||||| |||| Sbjct 1572256 ATGCAGATCTTTGTCAAGACCTTGACTGGCAAGACTATCACCCTCGAGGTTGAGTCGTCT 1572315 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| | || | ||||| |||| || ||||||||| ||| | || || |||||| Sbjct 1572316 GACTCCATTGAGAACGTCAAGCAGAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAG 1572375 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || |||||||| ||| | || ||| | || | || || ||| Sbjct 1572376 CAGCGCCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGTCGTACGCTTTCGGACTACAAC 1572435 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || ||||| || ||||| || ||||| || || | || | |||||| Sbjct 1572436 ATCCAAAAGGAGTCGACCCTCCATCTTGTCCTCCGTCTTCGTGGCGGT 1572483 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| ||||| ||||| || || || | || ||||| | || Sbjct 1572028 ATGCAGATTTTCGTCAAGACGCTGACCGGCAAGACCATTACACTTGAGGTTGAGTCATCT 1572087 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| | |||| || || |||| || |||||||| || | || || |||||| Sbjct 1572088 GACTCGATTGAAAATGTGAAGCAGAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAG 1572147 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||| || || |||||||| ||| | || || Sbjct 1572148 CAGCGTCTTATCTTTGCTGGCAAGCAGCTCGAGGA 1572182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766126968080