Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syncephalastrum_20racemosum_20[genbank_20GCA_5F002105135.1_202017- 04-20] 49 sequences; 30,745,403 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq47 91.5 1e-13 >seq47 Length=1968370 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| || || || || ||||| |||||||| || |||| | | |||| || Sbjct 80856 ACCAAATGCAGCGTCGATTCCTTTTGAATGTTGTAGTCCGAGAGAGTGCGACCGTCCTCG 80915 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || ||||| || | |||| |||||| || || ||||| ||||||||||| | Sbjct 80916 AGCTGCTTGCCCGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGA 80975 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| || ||| | || || || || ||| || || || ||||| || || Sbjct 80976 ATCTTGGCCTTGACATTGTCGATTGTGTCAGACGATTCAACTTCCAACGTAATAGTCTTG 81035 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||||||| || ||||| || |||||| Sbjct 81036 CCGGTCAGAGTCTTCACAAAGATCTGCATA 81065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391786569965