Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syncephalastrum_20racemosum_20[genbank_20GCA_5F002105135.1_202017- 04-20] 49 sequences; 30,745,403 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq45 100 4e-16 >seq45 Length=2374188 Score = 100 bits (110), Expect = 4e-16 Identities = 119/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 197437 CCGTTCATGTACAACACGTCAAAAGCAAAGA-CGCACACCTGGACGGTTATCTCTTCTTC 197495 || |||| ||| || |||||| ||||||| ||| |||||| || | || |||||||| Sbjct 1400277 CCATTCAGGTATAAGCAGTCAAAGGCAAAGATCGC-CACCTGTACTTTGATGTCTTCTTC 1400219 Query 197496 CTTGACATCTTTACGTTTTCTGGTCGCCAGCTTTTGAAAGGGAAGGATCTGCTTCTTCTC 197555 ||||||||||||||||| | ||| || |||||| || ||||| |||| ||||| Sbjct 1400218 TTTGACATCTTTACGTTTCCGGGTGCTGAGTACTTGAAAAGGCAGGATGCGCTTTTTCTC 1400159 Query 197556 AACGTCCCAAGCAACTGCCTCAGCGTCCAAGATGAAAGA 197594 |||||| || |||| |||| ||| | |||||| || Sbjct 1400158 CTTGTCCCATGCTACTGTCTCACAGTCGATGATGAAGGA 1400120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676729185503120