Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Syncephalastrum_20racemosum_20[genbank_20GCA_5F002105135.1_202017-
04-20] 49 sequences; 30,745,403 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq47 104 4e-17
>seq47
Length=1968370
Score = 104 bits (114), Expect = 4e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| || |||| ||||| || | ||| || |||||| ||||| || || || |
Sbjct 80622 CGCAGGACCAAATGCAGCGTGGACTCCTTTTGAATATTGTAGTCCGACAAAGTCCGTCCG 80681
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || | || || || ||||| || | | |||||| ||||| || || |||||||||
Sbjct 80682 TCCTCGAGCTGCTTGCCCGCAAAGATAAGACGCTGTTGGTCAGGCGGAATGCCTTCTTTA 80741
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
|| || || |||| ||| | ||| || ||||| || || || || |||| ||||||
Sbjct 80742 TCCTGGATCTTGGCTTTCACATTATCGATCGTATCAGATGATTCGACCTCTAATGTTATA 80801
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| | || || ||||| ||||||||
Sbjct 80802 GTCTTGCCTGTCAAGGTCTTGACAAAAATTTGCAT 80836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899653848961680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |