Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syncephalastrum_20racemosum_20[genbank_20GCA_5F002105135.1_202017- 04-20] 49 sequences; 30,745,403 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq47 98.7 2e-15 >seq47 Length=1968370 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCC 171920 || ||||| | || | ||| || |||||| || || || |||| ||| |||| || Sbjct 80628 ACCAAATGCAGCGTGGACTCCTTTTGAATATTGTAGTCCGACAAAGTCCGTCCGTCCTCG 80687 Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980 | || || || ||||| || | | |||||||||||| || || ||||||||||| || Sbjct 80688 AGCTGCTTGCCCGCAAAGATAAGACGCTGTTGGTCAGGCGGAATGCCTTCTTTATCCTGG 80747 Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040 || || ||| |||||| || ||||| || ||||| || |||| || || || || Sbjct 80748 ATCTTGGCTTTCACATTATCGATCGTATCAGATGATTCGACCTCTAATGTTATAGTCTTG 80807 Query 172041 CCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || || | || || ||||| Sbjct 80808 CCTGTCAAGGTCTTGACAAAAATTTGCAT 80836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135445604200