Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syncephalastrum_20racemosum_20[genbank_20GCA_5F002105135.1_202017- 04-20] 49 sequences; 30,745,403 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq47 89.7 4e-12 >seq47 Length=1968370 Score = 89.7 bits (98), Expect = 4e-12 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 282655 GTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAAC 282714 ||||||| || | ||||| || || || || ||||| | ||| ||| || || | Sbjct 1254476 GTCATTATAACGACGGCCAATCAAACGCTTGGCGTCAAAGACAGTGCGGGTAGGGTTGGC 1254535 Query 282715 TGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATA 282774 || ||||| ||||| ||||| ||||||||| | || || || || | || || Sbjct 1254536 AGCGTATTGATTCTTGGCGGCATCACCAATCAGACGCTCCTCATCCGTGAAAGCCACGTA 1254595 Query 282775 TGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCA 282834 || || || |||||| |||||| || || ||||||||||| || ||||| | | Sbjct 1254596 CGAGGGCGTGATGCGATGACCTTGGTCGTTGGCAATAATTTCCACGCGTCCATTCTTCTG 1254655 Query 282835 TACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 282876 ||||| |||||| | ||||| || | ||| |||||||| Sbjct 1254656 CACACCCACACAAGAGTAGGTTGTACCCAGATCGATACCAAT 1254697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740627994307074