Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syncephalastrum_20racemosum_20[genbank_20GCA_5F002105135.1_202017- 04-20] 49 sequences; 30,745,403 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq49 86.0 6e-12 >seq49 Length=1681262 Score = 86.0 bits (94), Expect = 6e-12 Identities = 117/162 (72%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 136661 CGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTTAAACCCTTCTCCCAGGAATAAT 136720 ||||||| |||| || || |||||||||||||| | |||||||| ||| || ||| Sbjct 828095 CGGCAGGCCGGGTTCGAAGGTAATACATGCCCGTCTTGAGACCCTTCTTCCAAGAGTAAA 828154 Query 136721 TATGTATAGATGACAAAATTTTATAGCTCGGATCGGCCACGAAAAGATTTAGCGATTGGC 136780 || || || | || |||| | || ||||| ||||| ||||| | ||| ||| Sbjct 828155 AGTGCATCGACGTCAGTCGGCCATAGTTTGGCTCGGCAACGAACAGATTCAACGACTGGG 828214 Query 136781 TCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTCAATA 136822 ||| |||||| ||| | ||||| ||||||||| |||||| Sbjct 828215 ACTGGTCGATGAAAGCAGCACGGTCGGCGGCCATG-TCAATA 828255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094127379680