Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syncephalastrum_20racemosum_20[genbank_20GCA_5F002105135.1_202017- 04-20] 49 sequences; 30,745,403 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq23 205 3e-47 seq47 165 2e-35 seq1 120 9e-22 seq46 95.1 4e-14 seq49 89.7 2e-12 seq48 89.7 2e-12 seq6 89.7 2e-12 seq5 87.8 5e-12 >seq23 Length=2864373 Score = 205 bits (226), Expect = 3e-47 Identities = 677/1048 (65%), Gaps = 16/1048 (2%) Strand=Plus/Plus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 ||||| | || ||||| ||||| || || || | |||||| || || || ||||| Sbjct 588 GCTGTCGTCACAGTACCCGCCTACTTCAACGACTCGCAGCGTCAGGCTACCAAGGATGCC 647 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 ||| |||||| || | || ||||| | || || || || || || ||||| || || Sbjct 648 GGCTCCATTGCCGGTCTGAACGTTCTCCGTATCATCAACGAGCCTACCGCTGCCGCCATC 707 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAG----aaaaaaaTATTCTTATTTTTGATTT 349785 || || || ||||| || || ||||| | | || |||| || ||||| || Sbjct 708 GCCTACGGTCTTGACAAGCAGA----CCAAGGGCGAGCACAACGTTCTCATCTTTGACTT 763 Query 349786 AGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 || || ||||| || ||||| || || | || | || ||||| || |||||||| || Sbjct 764 GGGCGGCGGTACGTTCGATGTCTCGCTTTTGACCATCGAGGAGGGTATCTTTGAAGTCAA 823 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 || |||||||| || || ||||| ||||| || || ||||| || ||||| || || Sbjct 824 GGCCACTGCTGGCGACACCCATCTCGGTGGTGAGGACTTTGACAACCGTCTGGTGAACCA 883 Query 349906 TTTTGTTAAAGAATTTAAGCGTCAAGCTAAA-ATTGATATTGGAGATAATCCTAGAGCAA 349964 ||| | | || || ||||| ||| | || | ||||| | || | | || Sbjct 884 CTTTATCCAGGAGTTCAAGCGA-AAGTTCAAGAAGGATATCTCTGGCAACGCCCGTGCCG 942 Query 349965 TGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAA 350024 | ||||| || | ||||| ||||| ||||||||||| |||| || || | |||| | Sbjct 943 TCCGTCGTCTGCGCACTGCTTGTGAGCGTGCTAAGCGCACCTTGTCCTCGTCGGCCCAGA 1002 Query 350025 CCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTG 350084 |||| || || ||||| || || || || || |||| | || | || |||| Sbjct 1003 CCTCCATCGAGATTGACTCGCTCTTCGAGGGTGTCGACTTCTACACCTCGCTGACCCGTG 1062 Query 350085 CTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAG 350144 | || || || || | |||||| || | | || ||||| || || || || | Sbjct 1063 CCCGTTTCGAGGAGCTGAACCAGGATCTCTTCCGTACCACCATGGAGCCGGTCGAGAAGG 1122 Query 350145 TATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTT 350204 | | ||||| || || ||| | | | ||| | || | |||||||||| Sbjct 1123 TCCTCCGTGATGCCAAGATCGACAAGGGTTCCGTCCACGAAATCGTCCTCGTTGGTGGTT 1182 Query 350205 CTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTT 350264 | || ||||| || || | || |||| | || || || || || ||||| ||||| | Sbjct 1183 CCACTCGTATCCCCAAGATCCAGAAGTTGGTTTCCGACTTCTTCAACGGCAAGGAACCCT 1242 Query 350265 CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTT 350324 | || || || || ||||| || ||||| |||||||| ||||| ||||| | ||| Sbjct 1243 GCAAGTCCATCAACCCTGATGAGGCCGTTGCCTATGGTGCCGCTGTACAGGCCGCCATTC 1302 Query 350325 TATCTGGAAATAAGAGTTCT---AAAATTGATGATCTATTACTACTAGATGTAACTCCAC 350381 | |||| | | | ||| || | |||| || | || || ||||| | || Sbjct 1303 TGACTGG---TGACACCTCTGAGAAGACTGATTCGCTCCTTCTGCTCGATGTTGCGCCTT 1359 Query 350382 TTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTA 350441 | || || || | || || | |||| || ||||| | | || | || | | Sbjct 1360 TGTCACTGGGTATCGAGACAGCCGGTGGTGTCATGACCGCCTTGATCAAGCGCAACACGA 1419 Query 350442 CTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAA 350501 |||| ||||| || ||||| ||| ||| || || | ||| || || ||||| | || Sbjct 1420 CTGTGCCTACCAAGAAGTCTGAAATTTTCTCGACCTATGCCGACAACCAGCCCGGTGTGC 1479 Query 350502 CAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAAT 350561 || || || | || ||||| ||||| ||||| || || || || || || | | Sbjct 1480 TCATCCAGGTCTACGAGGGTGAGCGTGCCCGCACCAAGGACAACAACTTGCTCGGCAAGT 1539 Query 350562 TTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCG 350621 || | | | || ||||| || | || || || ||||| || ||| | || | Sbjct 1540 TTGAGTTGACCGGCATCCCACCTGCCCCGCGTGGTGTGCCGCAGATCGAGGTCACCTTTG 1599 Query 350622 ATATTGATTCAAATGGTATTTTAAATGT 350649 || | || | ||||||||||| || || Sbjct 1600 ATGTCGACGCGAATGGTATTTTGAACGT 1627 Score = 174 bits (192), Expect = 5e-38 Identities = 177/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || |||||||| || || ||||| || || ||||| || || Sbjct 1572258 CATACCACCACGGAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATATTGTAGTC 1572199 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || ||||||||||| ||||| ||||| || || Sbjct 1572198 GGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCCGG 1572139 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || || || || || || ||||| |||||||| ||||||| || Sbjct 1572138 AGGAATACCCTCCTTGTCTTGGATCTTCTGCTTCACATTTTCAATCGAGTCAGATGACTC 1572079 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| |||||||||| ||||| ||||| || || || || ||||||||||| Sbjct 1572078 AACCTCAAGTGTAATGGTCTTGCCGGTCAGCGTCTTGACGAAAATCTGCAT 1572028 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| | ||| ||||||||||| || || || || || || Sbjct 1572030 CATACCACCACGCAGGCGGAGAACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTC 1571971 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||||||||| || || ||||| || || ||||| ||||| || || Sbjct 1571970 AGAGAGAGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGG 1571911 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || || || || || || ||||| || || || ||||||| || Sbjct 1571910 AGGAATACCCTCCTTGTCTTGGATCTTCTGCTTCACATTTTCGATAGAGTCAGATGACTC 1571851 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| || || | ||||| ||||| | || || || ||||||||||| Sbjct 1571850 AACTTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 1571800 Score = 154 bits (170), Expect = 4e-32 Identities = 175/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || |||||||| ||||| ||||| || || || || | Sbjct 1571578 TTTGCATACCACCACGGAGACGGAGCACAAGATGGAGAGTGGACTCCTTCTGGATGTTGT 1571519 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || |||||||| | || || ||||||||||| || || ||||||| Sbjct 1571518 AATCGGAGAGGGTGCGGCCATCTTCCAACTGCTTGCCAGCAAAGATGAGGCGCTGCTGAT 1571459 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| || || || || ||||| || || || || || || || || || | Sbjct 1571458 CCGGAGGAATGCCCTCCTTGTCTTGAATCTTCTGCTTGACGTTCTCGATAGAGTCGGAAG 1571399 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || |||||||| || | ||||| ||||| || || || || ||||||||||| Sbjct 1571398 ACTCGACTTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 1571344 Score = 131 bits (144), Expect = 5e-25 Identities = 170/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 |||| | ||| ||||| | | || |||||||| || || ||||| ||||| || || | Sbjct 1572490 TTTAGAAACCGCCACGAAGACGGAGGACAAGATGGAGGGTCGACTCCTTTTGGATGTTGT 1572431 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || || ||||| || || ||||||||||| || || ||||| | Sbjct 1572430 AGTCCGAAAGCGTACGACCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGT 1572371 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||| || || || || |||||||| || || || || ||||| || ||||| | Sbjct 1572370 CCGGAGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTCTCAATGGAGTCAGACG 1572311 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || || | ||||| || || | || || ||||| |||||||| Sbjct 1572310 ACTCAACCTCGAGGGTGATAGTCTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 1572256 Score = 129 bits (142), Expect = 2e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| | ||||| || || || |||||||| || ||||| Sbjct 1571802 CATACCACCACGCAGGCGGAGAACCAAGTGAAGGGTGGATTCCTTTTGAATGTTGTAATC 1571743 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||| || || || || ||||||||||| || || ||||| || || Sbjct 1571742 AGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGG 1571683 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || || || || || || || || |||||||| || || | || Sbjct 1571682 AGGGATGCCCTCCTTGTCTTGGATCTTCTGCTTGACGTTCTCAATCGAGTCGGACGACTC 1571623 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || || | ||||| || || | || || ||||| || ||||| Sbjct 1571622 AACCTCGAGGGTGATAGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 1571572 Score = 95.1 bits (104), Expect = 4e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || || ||||| ||||| || || || |||| || ||||| || |||||||| ||| Sbjct 121 GGCATTGATTTGGGTACCACATACAGCTGCGTTGGCGTATGGCAGAACGATCGTGTCGAA 180 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 || || || || || || || ||| | || || || || ||||| || || || || ||| Sbjct 181 ATTATCGCCAACGACCAGGGCAACCGCACCACACCTTCCTACGTGGCCTTCACTGACACT 240 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTG 349364 ||||| ||||||||||| | || || || |||| |||| Sbjct 241 GAGCGCCTGATTGGTGATGCCGCCAAGAACCAAGTGGCTG 280 Score = 91.5 bits (100), Expect = 4e-13 Identities = 548/876 (63%), Gaps = 8/876 (1%) Strand=Plus/Minus Query 182919 ACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGT 182978 || || ||||||||||| | ||| |||||||| | || || ||||| || ||||| || Sbjct 1627 ACGTTCAAAATACCATTCGCGTCGACATCAAAGGTGACCTCGATCTGCGGCACACCACGC 1568 Query 182979 GGCATTGGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTT 183038 || ||||| || || || || ||| | || | || || || || || | Sbjct 1567 GGGGCAGGTGGGATGCCGGTCAACTCAAACTTGCCGAGCAAGTTGTTGTCCTTGGTGCGG 1508 Query 183039 GCTCTCTCGCCTTCATATACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAA 183098 || | ||| || || || || || || || | ||||| || || ||| || || Sbjct 1507 GCACGCTCACCCTCGTAGACCTGGATGAGCACACCGGGCTGGTTGTCGGCATAGGTCGAG 1448 Query 183099 AAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGCG-GAACAATTACAGTCATTAC 183157 |||| || || || |||| | ||| | || ||| || ||| | ||||| || Sbjct 1447 AAAATTTCAGACTTCTTGGTAGGCACAGTCGTGTTGCGCTTGATCAAGG-CGGTCATGAC 1389 Query 183158 TTCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATA---AATC 183214 | | ||| || || | || | ||| || || || ||||| || | | | |||| Sbjct 1388 ACCACCGGCTGTCTCGATACCCAGTGACAAAGGCGCAACATCGAGCAGAAGGAGCGAATC 1329 Query 183215 TGATGTTTTATCTGATTTAATATCACTTAAAATTGCAGCTTGAACAGCTGCACCATATGC 183274 | | || || || | | || | | ||| || || || ||||| |||||||| || Sbjct 1328 AG---TCTTCTCAGAGGTGTCACCAGTCAGAATGGCGGCCTGTACAGCGGCACCATAGGC 1272 Query 183275 AACAGCTTCATCTGGGTTAATTGAACGAGATAATTCTTTGCCATTAAAAAATTCTGAAAG 183334 ||| || ||||| ||||| || || | ||| ||||| || || || || |||| Sbjct 1271 AACGGCCTCATCAGGGTTGATGGACTTGCAGGGTTCCTTGCCGTTGAAGAAGTCGGAAAC 1212 Query 183335 CATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGATATT 183394 || | || || || || || | ||| |||||||| || | || | ||| | || Sbjct 1211 CAACTTCTGGATCTTGGGGATACGAGTGGAACCACCAACGAGGACGATTTCGTGGACGGA 1152 Query 183395 ACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAA 183454 || || || | | ||| | || || || || || ||||| || | | || Sbjct 1151 ACCCTTGTCGATCTTGGCATCACGGAGGACCTTCTCGACCGGCTCCATGGTGGTACGGAA 1092 Query 183455 TAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaaaaaaaGTCAATACC 183514 | ||| | ||| || || | || | || | || | | ||||| | ||| Sbjct 1091 GAGATCCTGGTTCAGCTCCTCGAAACGGGCACGGGTCAGCGAGGTGTAGAAGTCGACACC 1032 Query 183515 ATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGATAATGTTCTTTTAGC 183574 | | | || ||||| || || || || || | || || || || || | ||||| Sbjct 1031 CTCGAAGAGCGAGTCAATCTCGATGGAGGTCTGGGCCGACGAGGACAAGGTGCGCTTAGC 972 Query 183575 TCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTGTAATATCTTGTTT 183634 || ||||| || || | || ||||| | | | | || | | ||||| | || Sbjct 971 ACGCTCACAAGCAGTGCGCAGACGACGGACGGCACGGGCGTTGCCAGAGATATCCTTCTT 912 Query 183635 ATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACC 183694 |||| || || || ||||| || | | | | | ||||| || ||||| Sbjct 911 GAACTTTCGCTTGAACTCCTGGATAAAGTGGTTCACCAGACGGTTGTCAAAGTCCTCACC 852 Query 183695 ACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAA 183754 ||| | ||| || ||||||||||| || || |||||||| || || || || || | || Sbjct 851 ACCGAGATGGGTGTCGCCAGCAGTGGCCTTGACTTCAAAGATACCCTCCTCGATGGTCAA 792 Query 183755 AATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 || || ||||| || ||||| || ||||| ||||| Sbjct 791 AAGCGAGACATCGAACGTACCGCCGCCCAAGTCAAA 756 >seq47 Length=1968370 Score = 165 bits (182), Expect = 2e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || ||||| || || || || || ||||| || ||||| Sbjct 81062 CATACCACCACGGAGACGAAGCACGAGATGGAGGGTCGATTCCTTCTGAATGTTGTAATC 81121 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || |||||||| || |||||||| ||||| ||||| ||||| Sbjct 81122 CGAGAGGGTGCGACCGTCCTCGAGTTGTTTGCCGGCAAAGATCAGACGCTGCTGGTCAGG 81181 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||| || |||||||| || | || ||||| ||||| | ||||| | || Sbjct 81182 CGGGATGCCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTC 81241 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||||| || | ||||||||||| ||||| || || || |||||||| Sbjct 81242 GACTTCAAGGGTTATAGTCTTTCCGGTAAGTGTCTTGACGAAGATCTGCAT 81292 Score = 161 bits (178), Expect = 3e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || | ||| || || ||||| ||||||||||| || || || || || || || || Sbjct 80625 AGGACCAAATGCAGCGTGGACTCCTTTTGAATATTGTAGTCCGACAAAGTCCGTCCGTCC 80684 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || || |||||||| ||||| || || ||||| ||||| |||||||||||| Sbjct 80685 TCGAGCTGCTTGCCCGCAAAGATAAGACGCTGTTGGTCAGGCGGAATGCCTTCTTTATCC 80744 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || ||||| |||||||| |||| |||||||| ||| || || | ||| | ||| Sbjct 80745 TGGATCTTGGCTTTCACATTATCGATCGTATCAGATGATTCGACCTCTAATGTTATAGTC 80804 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || || |||||||| ||||| Sbjct 80805 TTGCCTGTCAAGGTCTTGACAAAAATTTGCAT 80836 Score = 98.7 bits (108), Expect = 3e-15 Identities = 440/690 (64%), Gaps = 14/690 (2%) Strand=Plus/Minus Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261 || || |||||| | ||||| || || |||||||| | ||| | | |||| || || Sbjct 1254697 ATTGGTATCGATCTGGGTACAACCTACTCTTGTGTGGGTGTGCAGAAGAATGGACGCGTG 1254638 Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 ||||| ||||| || || |||||| | | | ||||| || ||||| || || || || Sbjct 1254637 GAAATTATTGCCAACGACCAAGGTCATCGCATCACGCCCTCGTACGTGGCTTTCACGGAT 1254578 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 |||||| ||||||||||| | || || |||||| ||||| || || | || Sbjct 1254577 GAGGAGCGTCTGATTGGTGATGCCGCCAAGAATCAATACGCTGCCAACCCTACCCGCACT 1254518 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGAT 349441 || ||||| || ||||| | ||||| | ||| | |||||| || | || Sbjct 1254517 GTCTTTGACGCCAAGCGTTTGATTGGCCGTCGTTATAATGACAAGGACGTCCAGGCCGAC 1254458 Query 349442 CTAAAACATTTTCCTTTTACTGTTGTTCCAAAAG-ACGG--TGATAAACCAATTATTGAG 349498 || || || || || | | | || | ||| |||| || || | || | Sbjct 1254457 AAGAAGCACTTCCCCTTCA-AGCTCGTCAACAAGAACGGCCTG-----CCCAACATCCAA 1254404 Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTT-TTACCCGAAGAAATTTCATCAATGGTTTT 349557 || | | | |||| | | | || ||| ||||| || || || ||||| | Sbjct 1254403 GTCG-ACGTCAAGGGCAGCGACCGCACTTTCACCCCCGAGGAGATCTCTGGTATGGTCCT 1254345 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 || |||||||| | || || || || | || | | || || |||| ||| | Sbjct 1254344 TACCAAGATGAAGGAGACCGCCGAGGCTTACCTCGGCAAGCCCGTCACCCATGCCGTTGT 1254285 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 || || || ||||| || || || ||||||||| || || || || || || | ||| Sbjct 1254284 CACCGTTCCCGCCTACTTCAACGACGCCCAGCGTCAAGCTACCAAGGACGCCGGTACCAT 1254225 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 ||| || | || |||| | || || || || ||||| || || || || || || || Sbjct 1254224 TGCCGGTCTGAACATTCTCCGTATCATCAACGAGCCCACCGCGGCCGCCATCGCCTACGG 1254165 Query 349738 GCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 || || || | | | || || |||| | | ||| || ||||||||||| Sbjct 1254164 TCTGGACAA---GTCCGGCGGTGAGCGCAACGTTCTCGTCTATGACTTGGGTGGTGGTAC 1254108 Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857 ||||||||| || || || | | || || | || ||||| || || || || || Sbjct 1254107 TTTTGATGTCTCGCTGCTTTCCATCGAGGACGATATCTTTGAGGTCTTGGCCACCGCCGG 1254048 Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGA 349887 ||| || || | ||||| || || ||||| Sbjct 1254047 TGACACCCACTTGGGTGGTGAGGACTTTGA 1254018 >seq1 Length=4845341 Score = 120 bits (132), Expect = 9e-22 Identities = 497/780 (64%), Gaps = 8/780 (1%) Strand=Plus/Plus Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 ||||| || ||| | ||||||||||| || ||||| || || || || | || || || Sbjct 4339462 CTTATCTTCGATCTTGGTGGTGGTACCTTCGATGTGTCCCTCCTGACCATCGAGGACGGT 4339521 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 || || || || || || || |||||||| || || | ||||| || || ||||| || Sbjct 4339522 ATCTTCGAGGTCAAGGCCACCGCTGGTGACACTCACTTGGGTGGTGAGGACTTTGACAAC 4339581 Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCT-AAAATTGATATTGGAGA 349950 ||||| || || || | | || || ||||| |||| | || | ||||| | Sbjct 4339582 CGTCTTGTCAACCACTTCATGCAGGAGTTCAAGCG-CAAGTTCAAGAAGGATATCTCCGG 4339640 Query 349951 TAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATC 350010 || | | || | ||||| || | ||||| || || ||||| ||||| | | || Sbjct 4339641 CAACGCCCGTGCCGTCCGTCGTCTCCGCACTGCTTGCGAGCGTGCGAAGCGCACTCTCTC 4339700 Query 350011 ATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTC 350070 || || |||| ||||| || || ||||| || || || || || |||| | Sbjct 4339701 CTCGTCTGCCCAGACCTCCATCGAGATTGACTCGCTCTTCGAGGGTGTTGACTTCTACAC 4339760 Query 350071 ATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGA 350130 || | || ||||| || || || || | |||||| || | | || ||||| Sbjct 4339761 CTCGTTGACCCGTGCCCGTTTCGAGGAGCTCAACCAGGATCTCTTCCGTGGCACCATGGA 4339820 Query 350131 TCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGT 350190 || || || || || | || || || || ||| | | | || | || Sbjct 4339821 CCCCGTTGAGAAGGTCCTCCGTGACGCCAAGATCGACAAGGGTTCCGTCCACGACATTGT 4339880 Query 350191 TTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAA 350250 | || |||||||| || ||||| || || || || || | | ||||| || || || Sbjct 4339881 CCTTGTCGGTGGTTCCACCCGTATCCCCAAGGTCCAGAAGCTCGTCTCTGACTTCTTCAA 4339940 Query 350251 TGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGT 350310 ||||| || || | || || || || ||||| || ||||| || |||||||| || Sbjct 4339941 CGGCAAGGAGCCCAACCGCTCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCTGCCGT 4340000 Query 350311 TCAGGCATCTATTTTATCTGGAAATAAGAGTTC---TAAAATTGATGATCTATTACTACT 350367 ||||| | ||| | || || | | | ||| || | | || || | || || Sbjct 4340001 CCAGGCCGCCATTCTCTCCGG---TGACACTTCCGAGAAGACCCAGGACCTGCTCCTGCT 4340057 Query 350368 AGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTAT 350427 ||||| |||| || ||||| || | || || |||||| || ||||| | || || Sbjct 4340058 CGATGTTGCTCCCCTCTCGCTCGGTATCGAGACCGCTGGTGGCGTCATGACCGCCCTGAT 4340117 Query 350428 TCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAA 350487 | || | || || || || || |||||| | | || || || | || || || Sbjct 4340118 CAAGCGTAACACCACCGTCCCCACCAAGAAGTCCGAGATCTTCTCCACCTACGCTGACAA 4340177 Query 350488 TCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAA 350547 ||||| | || || || || || || ||||| ||||| ||||| || || || || Sbjct 4340178 CCAGCCCGGTGTCTTGATCCAGGTCTTCGAGGGTGAGCGTGCCCGCACCAAGGACAACAA 4340237 Score = 89.7 bits (98), Expect = 2e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | Sbjct 744 GGGGATGTAGCTCAAGTGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACTGGGATCGATG 803 Query 235950 CCCAGCATCTCCAT 235963 |||||| ||||||| Sbjct 804 CCCAGCTTCTCCAT 817 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | Sbjct 4578660 GGGGATGTAGCTCAAGTGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACTGGGATCGATG 4578719 Query 235950 CCCAGCATCTCCA 235962 |||||| |||||| Sbjct 4578720 CCCAGCTTCTCCA 4578732 >seq46 Length=2048726 Score = 95.1 bits (104), Expect = 4e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || ||||| |||||||| ||||| || || || || || || Sbjct 962335 ATACCACCACGGAGACGGAGCACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCG 962394 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || ||||| ||||| || || ||||| || || ||||| |||||||| || Sbjct 962395 GAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGATCCGGG 962454 Query 140628 GGAATTCCTT 140637 ||||| |||| Sbjct 962455 GGAATACCTT 962464 >seq49 Length=1681262 Score = 89.7 bits (98), Expect = 2e-12 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 235886 ATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATC 235945 ||| |||||||||| |||| ||||||| ||||||||| |||||||||||| || |||||| Sbjct 1674973 ATATGGGGATGTAGCTCAAGTGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACTGGGATC 1675032 Query 235946 AAAACCCAGCATCTCCA 235962 | |||||| |||||| Sbjct 1675033 GATGCCCAGCTTCTCCA 1675049 >seq48 Length=1814144 Score = 89.7 bits (98), Expect = 2e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | Sbjct 60886 GGGGATGTAGCTCAAGTGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACTGGGATCGATG 60827 Query 235950 CCCAGCATCTCCAT 235963 |||||| ||||||| Sbjct 60826 CCCAGCTTCTCCAT 60813 Score = 89.7 bits (98), Expect = 2e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | Sbjct 207388 GGGGATGTAGCTCAAGTGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACTGGGATCGATG 207447 Query 235950 CCCAGCATCTCCAT 235963 |||||| ||||||| Sbjct 207448 CCCAGCTTCTCCAT 207461 Score = 86.0 bits (94), Expect = 2e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || ||||| ||||| || ||||| || ||||| || || || Sbjct 1641608 ATACCACCACGGAGACGGAGCACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCC 1641549 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || || || || || || || ||||| || || ||||| ||||| || || Sbjct 1641548 GAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGG 1641489 Query 140628 GGAATTCCTTCTTTA 140642 ||||| ||||| ||| Sbjct 1641488 GGAATGCCTTCATTA 1641474 >seq6 Length=208146 Score = 89.7 bits (98), Expect = 2e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 235889 GGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAA 235948 ||||||||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | Sbjct 37750 GGGGGATGTAGCTCAAGTGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACTGGGATCGAT 37691 Query 235949 ACCCAGCATCTCCA 235962 |||||| |||||| Sbjct 37690 GCCCAGCTTCTCCA 37677 >seq5 Length=680425 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| |||||||||||| || |||||| | Sbjct 42195 GGGGATGTAGCTCAAGTGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACTGGGATCGATG 42136 Query 235950 CCCAGCATCTCCA 235962 |||||| |||||| Sbjct 42135 CCCAGCTTCTCCA 42123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253448704347