Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Syncephalastrum_20racemosum_20[genbank_20GCA_5F002105135.1_202017-
04-20] 49 sequences; 30,745,403 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq47 284 1e-71
seq49 143 3e-29
seq45 109 6e-19
>seq47
Length=1968370
Score = 284 bits (314), Expect = 1e-71
Identities = 1123/1743 (64%), Gaps = 44/1743 (3%)
Strand=Plus/Minus
Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162
|| ||| || | || ||||| || || || || || || ||||| || || | | |
Sbjct 706860 CCGCAGCACATGTTGATGCGTGTGGCTGTGGGTATTCACGGCGAGGATATCGAAGGCGCC 706801
Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222
||||| ||| |||| ||| |||| | ||| || ||||||| || ||||| |||
Sbjct 706800 ATTGAGACTTACAACCTCATGTCTGAGAAATACTTTACCCACGCGAGTCCCACCCTGTTC 706741
Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282
||||||||||| |||||| ||||| ||| || | || | |||||||| ||
Sbjct 706740 AACGCCGGTACCCCTCGTCCGCAGCTGTCGTCCTGCTTTTTGTTGACCATGAAGGAGGAT 706681
Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342
||||| |||||||| || || || || ||| | || || |||||| | ||
Sbjct 706680 TCGATTGAAGGCATCTATGAAACTCTGAAAATTTGCTCCCAAATTTCCAAGACCGCGGGT 706621
Query 19343 GGTATCGGGATCCACTGCTCGAATATCCGGTC----GAGTGGTACACGAATCAATGGGAC 19398
|| ||||| || || | | |||||| | | | ||||| || ||| ||
Sbjct 706620 GGCATCGGTCTCAACATCCACCAGATCCGGGCTTCCGGCTCGTACA----TCGCTGGTAC 706565
Query 19399 GAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTA 19458
|| || || |||| ||||| || ||||||||||| | ||| |||||||| | ||
Sbjct 706564 CAATGGTTATTCCAACGGCATCGTGCCTATGCTCCGCGTTTACAATAACACGGCTCGCTA 706505
Query 19459 CGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCA 19518
||| | || || ||| ||| ||| ||| | |||||||||||||||||||| |||||
Sbjct 706504 TGTCGATCAAGGTGGCAACAAGCGCCCGGGTGCTTTCGCCATCTACCTCGAGCCCTGGCA 706445
Query 19519 CGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTG 19578
| |||| || | ||||| || || ||| |||| || | ||||||| |||
Sbjct 706444 CCCGGATGTGTTCTCGTTCCTGGACCTCCGCAAGAACACCGGCAAGGAGGAGAATCGCGC 706385
Query 19579 TCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGA 19638
|| ||||| ||| ||||| ||||| || || || |||||| || || || || |
Sbjct 706384 GCGTGACCTGTTCTATGCCTTATGGATCCCTGATCTTTTCATGAAGCGTGTCGAAGAGAA 706325
Query 19639 CGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGA 19698
| |||||| | || | ||||| |||| || || || | ||| || | |||||
Sbjct 706324 TGGTGAATGGAGCTTGTTCTGCCCAAGCGAAGCACCAGGTCTTCACGAGGTGTGGGGCGA 706265
Query 19699 GGCGTTCAATGAGTTGTACCGGACTTACGTA-GCCCAGGGCCGGTTCAAGAAGGTGGTCC 19757
| ||| | ||| |||||| |||| | | ||| | | | || || |||
Sbjct 706264 GAAGTTTGAGGAGCTGTACCATCAATACGAACGTGAAGGTCGCGCGCGCCAA-GTTGTCA 706206
Query 19758 GGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACA 19817
||| | | | ||||| | | || | | || |||||| || || | ||
Sbjct 706205 AGGCACAGAAGCTCTGGTATGCCATCTTGGAGGCACAAACCGAGACAGGTGGCCCCTTCA 706146
Query 19818 TGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGT 19877
|| ||||||||||| ||| ||| ||||| ||| ||||| | ||| |||||||||
Sbjct 706145 TGCTGTACAAGGACGCGTGTAACCGCAAATCAAACCAGCAGAACTTGGGCACGATCAAGT 706086
Query 19878 CGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTA 19937
||| || ||||| || ||| | ||| |||| |||||||| || || || |
Sbjct 706085 GCAGCAATCTCTGTACAGAGATCGTCGAGTACTCCAGTCCGGACGAAGTAGCTGTATGCA 706026
Query 19938 ATCTGGCGTCCCTGTGCCTGCCGACTTTCGTCAAG----GCCTCCTCCTTCGACTTTGCC 19993
|| |||| ||| |||| || || |||||| || | || || ||| |
Sbjct 706025 ATTTGGCCAGTCTGGCTTTGCCCACCTTTGTCAAGAATCGCGAAGT-GTTTGA-TTTCCA 705968
Query 19994 AAA-TTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCG-TCATCGATCGGA 20051
||| ||| |||| || | ||| || ||||| || || || | | | ||||| |
Sbjct 705967 AAAGTTGCACGATGTTGTCAAGGTTGTGACGCGCAA-CTTAAACAAGATTATCGACATCA 705909
Query 20052 ACTTTTACCC---GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGA 20108
||| || || | | || || | |||| || || ||||| || || || ||||
Sbjct 705908 ACTACTATCCTGTGCCTGAAGCTGAGCGC---TCAAACATGCGTCATCGTCCCATCGGTC 705852
Query 20109 TCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCA 20168
| || ||| | || || ||||| | || ||| || | || | |||| ||| |||
Sbjct 705851 TAGGTGTCAACGGTCTTGCCGATGCCTTTATGTTGATGCGCTACCCATTTGACTCGCCCG 705792
Query 20169 AGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAAT 20228
|||| | ||||||| ||||| ||| || | ||||| || || || || |
Sbjct 705791 AGGCCAAGAAACTCAACAGTCAGATCTTTGAGACCATCTACCATGCCGCTCTGGAGGCTT 705732
Query 20229 CGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCC-GCGTCC 20287
| ||| ||||| | |||| || |||| ||| | | | ||| |||| ||||||
Sbjct 705731 CCAACGAGCTCGCGGTCCTGAACGGTCCCTACGCGACTTACGA-AGGTAGCCCAGCGTCC 705673
Query 20288 GAGGGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGAGTTTTGGAGC------ 20341
|||| || | ||| ||| | ||| ||| || | || | ||| |
Sbjct 705672 AAGGGCGTCTTGCAGTATGACTTCTGGAACGTGACACCCACCGATCTATGGGACTGGGCT 705613
Query 20342 GCCCTCAAGGTTGAGATCAAGACCCACGGGCTT-CGCAACTCGTTGCTCGTCGCGCCCAT 20400
|||||||||| |||| | | || ||||| || |||||| |||| || || |||||
Sbjct 705612 GCCCTCAAGGCCAAGATTGCG-CAGACTGGCTTGCGTAACTCGCTGCTGGTGGCACCCAT 705554
Query 20401 GCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGAC 20460
|||||| ||||| || | ||||| |||| ||| || ||||| || |||||| |
Sbjct 705553 GCCGACTGCCTCAACTTCGCAGATTCTGGGCTTCAATGAATGCTTCGAACCTTACACGTC 705494
Query 20461 CAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGT 20520
|||| | ||| ||||| |||||||||| ||| || || ||| | || |
Sbjct 705493 CAACCTGTACACCCGTCGCGTTTTGGCCGGTGAATTCCAAATCGTTAACCCGTGGTTGCT 705434
Query 20521 CCGCGACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGA--ATGAAATTGTCCGA 20578
| || || | || | ||||| | | | |||| |||| |||||||
Sbjct 705433 CAAGGATCTGGTTGACATGGGCCTGTGGAACGACGATGTCAAGAACATGATCATGTCCGA 705374
Query 20579 GCCGGCGGGAGCGTCCAG-GCAT--TGGATATCCCCCAGAACCTCAAGGACATTTACAGG 20635
| || | ||||| |||| |||||||| | || ||||| | | | |||| |
Sbjct 705373 --CAATGGCTCCATCCAGCGCATCCCTAATATCCCCGAAAAGCTCAAAGCCCTCTACAAG 705316
Query 20636 ACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTAC 20695
|||||||||||| || | || ||||| |||||||| || || ||||||||||
Sbjct 705315 ACCGTATGGGAACTCTCGCAACGTCATATCATTGACATGGCAGCTGACCGCGGCGCCTTT 705256
Query 20696 ATCGACCAGTCCCAGTCGCTCAATGTCTTCA-TGGAGAATCCGAGCCTGGCGAAGCTGAG 20754
|| |||||| ||| || || |||| | ||| ||| || | |||| || ||||
Sbjct 705255 ATTGACCAGAGCCAAAGTCTAAACATCTTTATTGGCGAACCCAACTTTGGC-AAACTGAC 705197
Query 20755 CTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGAC 20814
||||| | || |||||| | ||||| |||||||| |||||||||||||| || ||
Sbjct 705196 GAGTATGCACTTTTATGGCTGGAAGAAGGGTCTCAAGACAGGCATGTACTATCTCCGCAC 705137
Query 20815 CCG 20817
||
Sbjct 705136 TCG 705134
Score = 271 bits (300), Expect = 8e-68
Identities = 1116/1745 (64%), Gaps = 46/1745 (3%)
Strand=Plus/Plus
Query 78186 GCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCAT 78245
||| || || | |||||||||||| |||||||||||||||||||| || || | ||||||
Sbjct 705133 GCGAGTGCGGAGATAGTACATGCCTGTCTTGAGACCCTTCTTCCAGCCATAAAAGTGCAT 705192
Query 78246 ACTCGACAGCTTGGCCAGACTCGGGTTCTCC-ATGAAGATGTTGAGCGACTGGGACTGGT 78304
||||| ||| || |||| | | |||||| || || |||||||| || ||| |||||
Sbjct 705193 ACTCGTCAG-TTTGCCAAAGTTGGGTTCGCCAATAAAGATGTTTAGACTTTGGCTCTGGT 705251
Query 78305 CGATGTACGCACCGCGGTCGGCCGCCATGTCGATGA-CCGACTTTTGCGGAATCTCCCAG 78363
| || | || |||||||| || |||||||| |||| ||| ||||| | |||||
Sbjct 705252 CAATAAAGGCGCCGCGGTCAGCTGCCATGTCAATGATATGAC-GTTGCGAGAGTTCCCAT 705310
Query 78364 ATGGTCCGGTAAATGGCCTTCAGCTCTTCCTGGAT----GTCCAGCGCTTGTACGCTCCC 78419
| |||| ||| | ||| || |||| ||| |||| | |||| || | | ||
Sbjct 705311 ACGGTCTTGTAGAGGGCTTTGAGCTTTTCGGGGATATTAGGGATGCGC-TGGATGGAGCC 705369
Query 78420 ACCGGCTCGCACAATTTCA--TTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGA 78477
| | ||| ||| ||| ||||| | | |||||| | || | |||
Sbjct 705370 ATTG--TCGGACATGATCATGTTCTTGACATCGTCGTTCCACAGGCCCATGTCAACCAGA 705427
Query 78478 TCCCGGACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAG 78537
||| || || | |||||| || ||| || ||||||| || || |||
Sbjct 705428 TCCTTGAGCAACCACGGGTTAACGATTTGGAATTCACCGGCCAAAACGCGACGGGTGTAC 705487
Query 78538 ATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCG 78597
| ||||| |||||| || ||||| || ||| |||| ||||| | || |||||
Sbjct 705488 AGGTTGGACGTGTAAGGTTCGAAGCATTCATTGAAGCCCAGAATCTGCGAAGTTGAGGCA 705547
Query 78598 GTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTT 78657
|||||||||||||| ||||| || || || || | ||| | | |||| | ||||
Sbjct 705548 GTCGGCATGGGTGCCACCAGCAGCGAGTTACGCAAGCCAGTCTGCGCAATCTTGGCCTTG 705607
Query 78658 AGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATA 78711
||| | |||||| | || | | | | ||| | ||| || | ||
Sbjct 705608 AGGGCAGCCCAGTCCCATAGATCGGTGGGTGTCACGTTCCAGAAGTCATACTGCAAGACG 705667
Query 78712 CCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCG 78771
|||| |||||| || || | | | ||| |||| | || | | ||||| |||
Sbjct 705668 CCCTTGGACGCTGGGCTACCTTCGTAAGTCGCGTAGGGACCGTTCAGGACCGCGAGCTCG 705727
Query 78772 CATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGC 78831
|| | ||| || || ||||| | | ||| ||||| ||||||| |
Sbjct 705728 TTGGAAGCCTCCAGAGCGGCATGGTAGATGGTCTCAAAGATCTGACTGTTGAGTTTCTTG 705787
Query 78832 GCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACG 78891
|||| || | ||| || | || | || ||| ||| ||||||| || || | |||
Sbjct 705788 GCCTCGGGCGAGTCAAATGGGTAGCGCATCAACATAAAGGCATCGGCAAGACCGTTGACA 705847
Query 78892 CCGATAGCGATCGGTCGGTGGCGCATGTT---GCTCTTTCGGGCCGCCTCGGTC---GGG 78945
|| | | |||| || || || |||||||| || || | || || | | ||
Sbjct 705848 CCTAGACCGATGGGACGATGACGCATGTTTGAGCGCT------CAGCTTCAGGCACAGGA 705901
Query 78946 TAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTAC 79005
|| |||| ||||| | ||| | ||| ||||| || ||| || |||| |
Sbjct 705902 TAGTAGTTGATGTCGATAATCTTGTTTAAGTTGCGCGTCACAACCTTGACAACATCGTGC 705961
Query 79006 AATTTGGCGAAATCAAAATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGA----TGC 79061
|| || ||||||||| | | || ||| | ||| |||| ||| | ||
Sbjct 705962 AACTTTTGGAAATCAAACACTTCGCGATTCTTGACA-AAGGTGGGCAAAGCCAGACTGGC 706020
Query 79062 CAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATT 79121
|| ||||| || || |||||||| || || ||||| ||| ||||| || | |||
Sbjct 706021 CAAATTGCATACAGCTACTTCGTCCGGACTGGAGTACTCGACGATCTCTGTACAGAGATT 706080
Query 79122 AGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTA 79181
||||||| ||||| | ||||| |||||| || |||||| |||||||||||
Sbjct 706081 GCTGCACTTGATCGTGCCCAAGTTCTGCTGGTTTGATTTGCGGTTACACGCGTCCTTGTA 706140
Query 79182 GCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCG 79241
|||| | || || ||||| || || | | | | | ||||| | | |
Sbjct 706141 CAGCATGAAGGGGCCACCTGTCTCGGTTTGTGCCTCCAAGATGGCATACCAGAGCTTCTG 706200
Query 79242 GGCCCGGACAACCTTCTTGTAC-CGACCCTGTGCGACGTACGT----CCGGTACAACTCG 79296
||| ||||| ||| | | ||||| | |||| ||| |||||| |||
Sbjct 706201 TGCCTTGACAA-CTTGGCGCGCGCGACCTT----CACGTTCGTATTGATGGTACAGCTCC 706255
Query 79297 TTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGC 79356
| || ||| || | || ||| | || || || ||| ||||| | || | |
Sbjct 706256 TCAAACTTCTCGCCCCACACCTCGTGAAGACCTGGTGCTTCGCTTGGGCAGAACAAGCTC 706315
Query 79357 CAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAG 79416
|| || | | || || || || |||||| || || |||||||| | ||| |||
Sbjct 706316 CATTCACCATTCTCTTCGACACGCTTCATGAAAAGATCAGGGATCCATAAGGCATAGAAC 706375
Query 79417 AGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATG 79476
||||| || || ||||||| | ||| |||| || || || || || |
Sbjct 706376 AGGTCACGCGCGCGATTCTCCTCCTTGCCGGTGTTCTTGCGGAGGTCCAGGAACGAGAAC 706435
Query 79477 ATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCC 79536
| || | |||||| ||||| || ||||||||||| | |||| ||||||| ||| ||
Sbjct 706436 ACATCCGGGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCGGGCGCTTGTTGCCACCT 706495
Query 79537 TGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCG 79596
|| | ||| || || |||||||| ||| |||| |||||||| ||||||||||||| ||
Sbjct 706496 TGATCGACATAGCGAGCCGTGTTATTGTAAACGCGGAGCATAGGCACGATGCCGTTGGAA 706555
Query 79597 ACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCG 79656
|| || || || ||| | ||| ||||| || | | || || |||
Sbjct 706556 TAACCATTGGTACCAGCGATGTACGAGCCGGAAGCCCGGATCTGGTGGATGTTGAGACCG 706615
Query 79657 ATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCG 79716
||||| || | |||||| || || | ||| || || || || |||||||| ||
Sbjct 706616 ATGCCACCCGCGGTCTTGGAAATTTGGGAGCAAATTTTCAGAGTTTCATAGATGCCTTCA 706675
Query 79717 ATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCG 79776
||||| || |||||||| | | || |||||| ||||| ||| || ||||||
Sbjct 706676 ATCGAATCCTCCTTCATGGTCAACAAAAAGCAGGACGACAGCTGCGGACGAGGGGTACCG 706735
Query 79777 GCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTC 79836
|||||||| ||||| || ||||||| || ||| | || | ||| || | ||| |||
Sbjct 706736 GCGTTGAACAGGGTGGGACTCGCGTGGGTAAAGTATTTCTCAGACATGAGGTTGTAAGTC 706795
Query 79837 TCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTAC 79896
|| || ||| || || |||||||| || || || || || ||||| || | || |
Sbjct 706796 TCAATGGCGCCTTCGATATCCTCGCCGTGAATACCCACAGCCACACGCATCAACATGTGC 706855
Query 79897 TGGGG 79901
|| ||
Sbjct 706856 TGCGG 706860
>seq49
Length=1681262
Score = 143 bits (158), Expect = 3e-29
Identities = 266/388 (69%), Gaps = 2/388 (1%)
Strand=Plus/Plus
Query 79515 ACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAG 79574
||| || ||||| || || || ||| ||||| | || || |||| ||| | || || |
Sbjct 829784 ACCGTTACGCTTTCCACCACCTTGGGTGACGAAACGCGCGGTGTCATTGTAGACACGCAA 829843
Query 79575 CATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCG 79634
|||||| |||||||||| | | |||||| || ||| || || || || ||
Sbjct 829844 CATGGGGACGATGCCGTTCGAGGTGCCGTTGGTGCCGGCAATATATGAGCCTGAAGCGCG 829903
Query 79635 AATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTT 79694
||| || | || | || | ||| |||| ||||||| || | ||||| |
Sbjct 829904 AATCTTTTGGAAGCTGCAGCCCACGCCACCGGCTGACTTGGAAATACGAGCGCAGGTGGT 829963
Query 79695 GAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGA 79754
| || || |||||||||||||| ||| || |||| ||| || ||||||| ||
Sbjct 829964 CAAGGTATCATAGATGCCCTCGATACTGTCATCTCTCATCTGGACGAGATAGCAGCTGGA 830023
Query 79755 CATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTT 79814
| ||| || ||| ||||| |||||||||||||| || |||||||| ||||| | ||
Sbjct 830024 GAGCTGAGGACGGTTTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGTGTGAAATATTT 830083
Query 79815 TTGGCTCATCAGATCGTACGTCTC-CTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGA 79873
|||| ||| | | ||| ||||| | | ||| | ||| ||||||||||||||
Sbjct 830084 TTGGGACATGAAACTGTATGTCTCGATAGCCGC-ATCAATGTCTGTGCCGTGGATGCCGA 830142
Query 79874 CCGCGACGCGCATGAAGAGGTACTGGGG 79901
||||||||||||| | || ||||||
Sbjct 830143 GGGCGACGCGCATGATCATGTGCTGGGG 830170
Score = 107 bits (118), Expect = 2e-18
Identities = 117/153 (76%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 78187 CGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATA 78246
|| ||||| | || ||||||||||||||||||||||||||||| ||| | ||||||
Sbjct 828103 CGGGTTCGAAGGTAATACATGCCCGTCTTGAGACCCTTCTTCCAAGAGTAAAAGTGCATC 828162
Query 78247 CTCGACAGCTTGGCCAGACTCGGGTTC-TCCATGAAGATGTTGAGCGACTGGGACTGGTC 78305
|| ||| | ||||| | | || || | | ||| | || | |||||||||||||||
Sbjct 828163 GACGTCAG-TCGGCCATAGTTTGGCTCGGCAACGAACAGATTCAACGACTGGGACTGGTC 828221
Query 78306 GATGTACGCACCGCGGTCGGCCGCCATGTCGAT 78338
|||| | ||| | |||||||| |||||||| ||
Sbjct 828222 GATGAAAGCAGCACGGTCGGCGGCCATGTCAAT 828254
Score = 105 bits (116), Expect = 7e-18
Identities = 235/353 (67%), Gaps = 6/353 (2%)
Strand=Plus/Minus
Query 20111 GGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAG 20170
|||||||||||| |||| || | ||| || |||| || | | |||||| ||| ||
Sbjct 828868 GGCGTCCAGGGCTTGGCTGATGCGTTCTTGCTGCTGCGCTTGCCTTTCGACTCACCCGAG 828809
Query 20171 GCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCG 20230
|| || | | ||||||| |||||||||| || | ||||| || || ||| || ||
Sbjct 828808 GCTCGTCAATTGAACAAGGACATCTTCGAGACCATTTACCATGCCGCGCTCGAGGCCTCT 828749
Query 20231 TGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAG 20290
||||| || || | || || || ||| |||| | | || ||||||| | |
Sbjct 828748 TGCGAGCTGGCGGAGGAATTGGGTCCTTACCAGACCTATGAAGGCTCGCCCGTCAGCCAA 828689
Query 20291 GGTATCCTCCAGCCGGACATGTGGGGCGTC------ACTGAGAATGAGTTTTGGAGCGCC 20344
||||||||||||| || |||||||| ||| | || |||| ||| || |
Sbjct 828688 GGTATCCTCCAGCACGATATGTGGGGTGTCCAAGGTTCAGACAATGTCGACTGGGCCGGC 828629
Query 20345 CTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCG 20404
| | |||| | || || | |||||||| ||||| ||||| ||||||||
Sbjct 828628 TTGCGTGCCAAGATTGCAAAGCATGGCGTGCGCAACTCCTTGCTTGTCGCACCCATGCCT 828569
Query 20405 ACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACAC 20457
|| ||| || ||||||| | || ||||| ||| ||||| || |||||
Sbjct 828568 ACGGCCAGTACGAGCCAGATCCTTGGCAACAATGAGTGCTTCGAACCTTACAC 828516
Score = 100 bits (110), Expect = 3e-16
Identities = 244/367 (66%), Gaps = 16/367 (4%)
Strand=Plus/Plus
Query 78547 GTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATG 78606
||||| || ||||| ||| ||||| || | ||||||| || ||| || ||||||
Sbjct 828516 GTGTAAGGTTCGAAGCACTCATTGTTGCCAAGGATCTGGCTCGTACTGGCCGTAGGCATG 828575
Query 78607 GGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAGGCCGTCC 78666
|||||||| || | || || || | |||||| | |||| | | | |||| ||
Sbjct 828576 GGTGCGACAAGCAAGGAGTTGCGCACGCCATGCTTTGCAATCTTGGCACGCAAGCCGGCC 828635
Query 78667 CAAAATTCATTCGCCGC------GATCCCCCACATGTCCGGTTGAAGGATACCCTCG--G 78718
|| |||| | | || |||||||| || | || |||||||| | | |
Sbjct 828636 CAGTCGACATTGTCTGAACCTTGGACACCCCACATATCGTGCTGGAGGATACCTTGGCTG 828695
Query 78719 ACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGA-- 78776
||| ||||| || | | |||| ||||| ||| |||| || || ||||| ||
Sbjct 828696 ACG--GGCGAGCCTTCATAGGTCTGGTAAGGACCCAATTCCTCCGCCAGCTCGCAAGAGG 828753
Query 78777 -CTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCT 78835
||||||| || || ||||| | | |||||||||| ||||||| | | || ||||
Sbjct 828754 CCTCGAGC---GCGGCATGGTAAATGGTCTCGAAGATGTCCTTGTTCAATTGACGAGCCT 828810
Query 78836 TGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGA 78895
|| |||||| | | || |||| || ||| |||| |||| |||||||||||| |
Sbjct 828811 CGGGTGAGTCGAAAGGCAAGCGCAGCAGCAAGAACGCATCAGCCAAGCCCTGGACGCCAA 828870
Query 78896 TAGCGAT 78902
| ||||
Sbjct 828871 GACCGAT 828877
Score = 91.5 bits (100), Expect = 2e-13
Identities = 135/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 20630 TACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGC 20689
|||| ||| || |||||| | | ||| ||| || |||||||| ||||| || |
Sbjct 828290 TACAAGACAGTGTGGGAACTGTCTCAGCGTGTCATTATTGACATGGCCGCCGACCGTGCT 828231
Query 20690 GCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGC-CTGGCGAA 20748
|| | ||||||||||||||||||| | ||| | ||| | | | || | | |||| |
Sbjct 828230 GCTTTCATCGACCAGTCCCAGTCGTTGAATCTGTTCGTTGCCGAGCCAAACTATGGCCGA 828171
Query 20749 GCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCT 20808
|||| || ||||| | ||| ||| | ||||| ||||||||||||||||| || ||
Sbjct 828170 -CTGACGTCGATGCACTTTTACTCTTGGAAGAAGGGTCTCAAGACGGGCATGTATTACCT 828112
Query 20809 GCGGACCCG 20817
|| |||||
Sbjct 828111 TCGAACCCG 828103
Score = 91.5 bits (100), Expect = 2e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCC-GCGAGT 19161
|| ||| || | ||||||| ||||| |||||||||| ||| ||| | ||| |
Sbjct 830170 CCCCAGCACATGATCATGCGCGTCGCCCTCGGCATCCACGGCACAGACATTGATGCGGCT 830111
Query 19162 CCGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTT 19221
|||||||||| | ||| ||| || | ||||| |||||||| || ||||| ||
Sbjct 830110 AT-CGAGACATACAGTTTCATGTCCCAAAAATATTTCACACACGCGACACCAACCCTCTT 830052
Query 19222 CAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGA 19281
|||||| ||||| ||| || ||| | || ||||| | || || |||| |||||
Sbjct 830051 CAACGCTGGTACAAACCGTCCTCAGCTCTCCAGCTGCTATCTCGTCCAGATGAGAGATGA 829992
Query 19282 CAGCATTGAGGGCATCTACGAGAC 19305
||| || ||||||||||| || ||
Sbjct 829991 CAGTATCGAGGGCATCTATGATAC 829968
>seq45
Length=2374188
Score = 109 bits (120), Expect = 6e-19
Identities = 114/147 (78%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTT 60031
||||| | ||| | | |||||||| ||| ||||| || ||||||||||||||||||||
Sbjct 1436170 TTTGCTGAGCGTTTGGTTGCTTTTGC-TGCTGTGGAGGGTATCTTCTTCTCTGGCTCGTT 1436228
Query 60032 CTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGA 60091
| || || |||||||| |||||||| || ||||| || |||| |||| ||||||
Sbjct 1436229 TGCCTCCATCTTTTGGCTCAAGAAGCGTGGTCTGATGCCTGGTCTGACTTTCAGCAACGA 1436288
Query 60092 GCTGATTTCCCGGGACGAGGGCCTCCA 60118
||| || || || ||||| || |||||
Sbjct 1436289 GCTCATCTCGCGTGACGAAGGTCTCCA 1436315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524464028560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |