Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Synchytrium_20endobioticum_20[genbank_20GCA_5F001399855.1_202015-10- 19] 423 sequences; 2,081,121 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq389 149 7e-31 >seq389 Length=4736 Score = 149 bits (164), Expect = 7e-31 Identities = 333/500 (67%), Gaps = 0/500 (0%) Strand=Plus/Plus Query 159280 ACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGA 159339 ||||| || ||| | |||||||||||||| ||| ||| | || || || ||||| || Sbjct 2606 ACAGGCTTCGATGCCATATCATTACAACCAAACAGTGGAGCTCAAGGCGAATATGCCGGC 2665 Query 159340 CTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGTTTG 159399 || ||| || ||| |||| ||| || || || | || | || || | Sbjct 2666 CTAAGAGCCATTAGAGCCTACCTTCACTCCAAGGGCGAAGAAAGTCGAGACGTTTGCCTA 2725 Query 159400 ATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTT 159459 ||||||| || || ||||| || || || |||||||| | ||| || ||||||||| Sbjct 2726 ATACCAGTTTCCGCCCATGGTACCAACCCAGCATCAGCCGCCATGTGTGGTATGAAAGTT 2785 Query 159460 GTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCA 159519 || |||||| |||||||| || ||| | ||| | ||||||| | | || ||| Sbjct 2786 GTCACTGTCAAATGTGATGAGCTAGGTAACCTGGACTTATCAGATCTACGGGAAAAGGCA 2845 Query 159520 ATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTA 159579 | | | || || || | || ||| | || |||||||| || ||||||| Sbjct 2846 AAAAAGCATGCAACGAGCCTCGCCGCCATCATGGTCACCTATCCATCAACGTATGGTGTC 2905 Query 159580 TTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATAT 159639 |||||| | |||| | | | ||| | || | |||| |||||||||| || || Sbjct 2906 TTTGAAGACAGTATCAAAGAAGTTTGTGAAATCATACATGTTCATGGTGGTCAAGTGTAC 2965 Query 159640 CTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCA 159699 | |||||||| || || || || || | || | ||||| || ||||| Sbjct 2966 ATGGATGGTGCTAACCTGAACGCCCAAATGGGATTGTGTAAACCTGCAGAAATCGGTGCT 3025 Query 159700 GATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCT 159759 ||||| ||||| | || || || ||||| || |||||||| ||||| ||||| || ||| Sbjct 3026 GATGTTTGTCACTTGAATTTGCACAAGACGTTTTGTATTCCTCATGGTGGTGGTGGACCT 3085 Query 159760 GGCGTAGGTCCTATTGGTGT 159779 || | || |||||||| || Sbjct 3086 GGTATGGGACCTATTGGAGT 3105 Score = 89.7 bits (98), Expect = 6e-13 Identities = 169/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 ||| | ||||| | || | ||||| || || || |||||||| || || || | Sbjct 1498 CAACGATTTGGGGTACCACTAGGATATGGTGGCCCACATGCTGCTTTTTTCGCTGTCAAG 1557 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562 || || | ||||| ||||| ||||| | | ||||| ||| |||| || Sbjct 1558 GATGAGCACAAGAGGAAGATGCCTGGTCGCTTAATAGGTGTCTCAAAAGATGTTACTGGC 1617 Query 158563 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCA 158622 || ||| ||| ||||| | ||||| ||| | || || ||||| | |||| || || Sbjct 1618 AAACCAGCCTACCGATTATCGCTACAAACTCGTGAACAACATATTCGTCGAGAGAAGGCC 1677 Query 158623 ACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCA 158682 || ||||| || || || || |||||| |||| ||||||||||||| | ||||| | Sbjct 1678 ACTAGTAATATTTGTACTGCCCAAGCATTGCTTGCTAATATGTCTGCCATGTATGCTGTT 1737 Query 158683 TATCATGGT 158691 || |||||| Sbjct 1738 TACCATGGT 1746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588048090679280