Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Synchytrium_20endobioticum_20[genbank_20GCA_5F001399855.1_202015-10- 19] 423 sequences; 2,081,121 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq99 105 5e-17 >seq99 Length=253 Score = 105 bits (116), Expect = 5e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || ||| | || || ||||| || || ||||| |||||| | | | Sbjct 252 GCGATCGGAATTGATCTCGGTACTACATACTCATGCGTCGGTGTATGGCAACACGATCGT 193 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| || |||||||||||||||||||||||||| || || || || ||| |||||| Sbjct 192 GTTGAGATCATTGCCAATGATCAAGGTAACAGAACGACGCCGTCCTACGTTGGTTTCACT 133 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || |||| | | | |||||||||| || ||| |||||| | | || |||| ||| Sbjct 132 GATTCTGAGCGTCTCATTGGTGATGCTGCCAAAAATCAAGTCGCCATGAACCCTATCAAC 73 Query 550172 ACTATTTT 550179 || |||| Sbjct 72 ACAGTTTT 65 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029273629852270