Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1005 98.7 2e-15 >seq1005 Length=21531 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 229758 GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAACTTTCTG 229817 ||| |||||| |||| | || || ||| | |||||||| ||||| | ||| | ||||| Sbjct 9902 GTTTCCAATCAAATACACTGAGATTTGGAACATGTACAAAAAGGCCGAAGCATCGTTCTG 9843 Query 229818 GACCACTGAGGAAGTTCCTCTGAACGCA-GACGTCGTCGACTGGCGTGAGAAACTCAATG 229876 ||| | || || ||| ||| | |||| || | | ||||| | |||||||||| Sbjct 9842 GACTGCCGAAGAGGTTGATCT-AGCGCATGATATTGAGCACTGGGAAAACAAACTCAATG 9784 Query 229877 ACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCGATGGTATTG 229936 || | ||| | |||| ||||||||||| || | ||||| |||| ||| || || || | Sbjct 9783 ACAATGAAAGATATTTTATCAAACACATTCTGGCCTTTTTTGCAGCCTCAGACGGAATAG 9724 Query 229937 TGATGGAAAATCT 229949 ||| |||||||| Sbjct 9723 TGAATGAAAATCT 9711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057797516715020