Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1005 154 2e-32 >seq1005 Length=21531 Score = 154 bits (170), Expect = 2e-32 Identities = 508/782 (65%), Gaps = 11/782 (1%) Strand=Plus/Plus Query 16776 ACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGC 16835 |||| ||||| | | | |||||| || |||||||| || ||||| ||||| | | Sbjct 9136 ACCCAAGTTCAACTAGCAGTCTATCGGCAACAAATTCAATGTATTGACACATGAGCACTT 9195 Query 16836 AGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAA 16895 ||||||||| ||||| || || | || || || ||||| ||| || || || Sbjct 9196 GGTTCATTCCAATAAGCGAGACTGGCAATGCATCTGTTAAAAACTCTTGTTCAATGCTAA 9255 Query 16896 CCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAA 16955 | ||||| | | ||| || | | |||||| || ||| | || || | ||| Sbjct 9256 CGGCTTCTGTGACAATGCTCAAGATTTTTTCCTCTGATGGTTTTCTTTGCAGGTACCTAA 9315 Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015 ||| ||||||| | ||||| || | |||||||| || | |||||||||||| || | Sbjct 9316 ACAACAGACATCCAAAATCTGTGTGAAGGCCCTCGTCCCTACAGATAAGTTCGTTTGAGA 9375 Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075 |||| | || ||||| |||| |||||| ||||| || || || || || || || | Sbjct 9376 ATGTAAGGCCTGGCATGAGCCCTCTTTTCTTCAACCAGAAGATGGCAGCAAAGGAGCCTG 9435 Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTT 17135 |||| || | |||||||| || || || | || || | | | || || | Sbjct 9436 AAAAAAAGACACCCTCGATTACAGCGAATGCAGCAAGACGCTCTCCAAAGCTGGCCTCCT 9495 Query 17136 TGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTA 17195 | | |||||||| |||| | |||||| | | || || || |||| | Sbjct 9496 TATCTTCTATCCATTTTAATGCCCATTGGGCTTTGCGTCTGATACAGGGAATGTTTTCAA 9555 Query 17196 TGGCCTTAAATAATTTCTCTTTTTCCTG-TAGGTCGATTATATACGTATCGATGAGTAGG 17254 || || || || | || ||| ||| | || | || || || || || | || Sbjct 9556 CTGCGTTGAA-AAGGTAGCTCTTTTCTGCTTCATCCTTAATGTATGTGTCTATCAAGAGT 9614 Query 17255 CTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCT 17314 ||||||||| ||| || |||||||| || || |||||||| |||| || ||| Sbjct 9615 GAGTACATTTCACTGTGGATATTCTCCATCATAATTTGGAATCCGTAGAAGCTACGTGCT 9674 Query 17315 TCCGCTATTTGAACTTCCACGTAGAATCGTT--CCGCTAGATTTTCGTTCACGATGCCGT 17372 || | ||| ||||| || || | ||| | |||||||| ||||| || |||| Sbjct 9675 TCTGGTATCTGAACCTC--TTTACCAAAGTTAAAAACAAGATTTTCATTCACTATTCCGT 9732 Query 17373 CGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTC---GTC-CGGTGTA 17428 | || || ||||| |||| || || || || |||||| |||| ||| | || Sbjct 9733 CTGAGGCTGCAAAAAAGGCCAGAATGTGTTTGATAAAATATCTTTCATTGTCATTGAGTT 9792 Query 17429 AGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTA 17488 | | ||||| || | ||| | | || ||| || ||||||| ||||| || Sbjct 9793 TGTTTTC-CCAGTGCTCAATATCATGCGCTAGATCAACCTCTTCGGCAGTCCAGAACGAT 9851 Query 17489 GCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACATAT 17548 || | |||||||| ||||| |||||||| ||| |||||| || || || | ||| || Sbjct 9852 GCTTCGGCCTTTTTGTACATGTTCCAAATCTCAGTGTATTTGATTGGAAACATCACAAAT 9911 Query 17549 CT 17550 || Sbjct 9912 CT 9913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517532958948720