Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1005 149 6e-31 >seq1005 Length=21531 Score = 149 bits (164), Expect = 6e-31 Identities = 495/760 (65%), Gaps = 29/760 (4%) Strand=Plus/Plus Query 16033 TCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCG 16092 |||||| || |||||||| || ||||||||||| | | || ||||| ||||| Sbjct 9155 TCTATCGGCAACAAATTCAATGTATTGACACATGAGCACTTGGTTCATTCCAATAAGCGA 9214 Query 16093 TACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATC 16152 || || | || | ||||||||| | |||||| || ||| |||||| | | || Sbjct 9215 GACTGGCAATGCATCTGTTAAAAACTCTTGTTCAATGCTAACGGCTTCTGTGACAAT--- 9271 Query 16153 GGTGGCTCGTG-TTTCAGACGGTGTATGGTTT-------AGGTGTTTAAACATTAGACAC 16204 |||| | ||| | || ||||||| |||| |||||| ||||| Sbjct 9272 ----GCTCAAGATTTTTTCCTCTG-ATGGTTTTCTTTGCAGGTACCTAAACAACAGACAT 9326 Query 16205 GCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCT 16264 | || || || || || ||||| || | |||||||||||| || || || | ||| Sbjct 9327 CCAAAATCTGTGTGAAGGCCCTCGTCCCTACAGATAAGTTCGTTTGAGAATGTAAGGCCT 9386 Query 16265 GGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATA 16324 ||||| |||| |||||| |||||||| || |||||||| || || ||||| || | | Sbjct 9387 GGCATGAGCCCTCTTTTCTTCAACCAGAAGATGGCAGCAAAGGAGCCTGAAAAAAAGACA 9446 Query 16325 CCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATC 16384 ||||| | || || || | || || | | | || || |||| ||| Sbjct 9447 CCCTCGATTACAGCGAATGCAGCAAGACGCTCTCCAAAGCTGGCCTCCTTATCTTCTATC 9506 Query 16385 CATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAAC 16444 ||||| | |||||| |||||| || | ||||| || |||| | || || || Sbjct 9507 CATTTTAATGCCCATTGGGCTTTGCGTCTGATACAGGGAATGTTTTCAACTGCGTTGAA- 9565 Query 16445 AATTTCTCTTTTTCCTGAAT-ATCGATTATATACGTATCAATCAGTAAACTGTACATTTC 16503 || | || ||| ||| | ||| | || || || || |||| | ||||||||| Sbjct 9566 AAGGTAGCTCTTTTCTGCTTCATCCTTAATGTATGTGTCTATCAAGAGTGAGTACATTTC 9625 Query 16504 TGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTG 16563 ||| || ||||| || || || ||||| ||||||| || || || | ||| || Sbjct 9626 ACTGTGGATATTCTCCATCATAATTTGGAATCCGTAGAAGCTACGTGCTTCTGGTATCTG 9685 Query 16564 TACTTCCACGTAAAATCGTT--CCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621 || || || | ||| | || || |||||||| || ||||| || ||| Sbjct 9686 AACCTC--TTTACCAAAGTTAAAAACAAGATTTTCATTCACTATTCCGTCTGAGGCTGCA 9743 Query 16622 AAAAACGCCAATATGTGCTTAATGAAATATTTTTC---GTCA--GATGTAAGAATATGCC 16676 ||||| |||| ||||| || || |||||| |||| |||| || || | | | || Sbjct 9744 AAAAAGGCCAGAATGTGTTTGATAAAATATCTTTCATTGTCATTGA-GTTTG-TTTTCCC 9801 Query 16677 AATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCT 16736 | | | | ||| | | || ||| || ||||| | ||||| || || | |||| Sbjct 9802 AGTGCTCAATATCATGCGCTAGATCAACCTCTTCGGCAGTCCAGAACGATGCTTCGGCCT 9861 Query 16737 TTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776 |||| ||||| |||||||| ||| |||||| || ||||| Sbjct 9862 TTTTGTACATGTTCCAAATCTCAGTGTATTTGATTGGAAA 9901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511401908703280