Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1084 86.0 5e-12 >seq1084 Length=6849 Score = 86.0 bits (94), Expect = 5e-12 Identities = 204/306 (67%), Gaps = 2/306 (1%) Strand=Plus/Plus Query 101534 TAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTCA 101593 || |||| ||| | |||| |||| | | || || ||||| ||||| | | | || Sbjct 3850 TATACAGACATGTTCATTGAAATTTTCGAATGAGGATTATAATTTTCAAGAGTGAAATCT 3909 Query 101594 TCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGGT 101653 || || || || ||||| | |||| ||||| | | ||| ||||| || || Sbjct 3910 TCAAATTGGAAATCCTCAATATTGGTAACAGTTCTATTGATACGAAGAGTTGGGAAAGGA 3969 Query 101654 CTAGGAGTTCGCGTCAA-CTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGC 101712 | ||| | ||| |||| ||| || || |||||||| | || || | ||| | ||||| Sbjct 3970 TTTGGAATGCGC-TCAAGCTGGATATTTAGAGCATCTACATGGTCCAAATACACATGAGC 4028 Query 101713 ATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCA 101772 ||| || ||| || || | | ||||||| || || || |||||||||||||| Sbjct 4029 ATCACCCATACAATAAATCAGTTTTCCAGGCTTAAGGTTGGTTACATGAGCAATCATAAT 4088 Query 101773 AGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCT 101832 ||| || || | || ||||||||||| || || |||| || ||||| ||| | Sbjct 4089 AGTCAATAGGGCGTAAGAGGCAATGTTAAAAGGAACGCCTAGGCCTGTATCACATGAGCG 4148 Query 101833 TTGATA 101838 ||||| Sbjct 4149 CTGATA 4154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361242597028454