Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1005 232 8e-56 seq1894 129 7e-25 seq732 129 7e-25 >seq1005 Length=21531 Score = 232 bits (256), Expect = 8e-56 Identities = 587/879 (67%), Gaps = 24/879 (3%) Strand=Plus/Plus Query 23865 TTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTG 23924 || || || || || ||||| || | | ||| || | ||||| || | |||| ||| Sbjct 9054 TTCTCAAAGAAGTTGGTTTTGCCCTGCATTGAAATCATATCCATAAAGCTGAATGGGTTG 9113 Query 23925 GTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCC 23984 || || ||| | | || || || | |||| | || |||||| || ||||| || Sbjct 9114 GTTGTGTTGTAGTGTTTGTTCAACCCAAGTTCAACTAGCAGTCTATCGGCAACAAATTCA 9173 Query 23985 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA 24044 || ||| ||| | | |||||||| ||||| ||||| | || | || Sbjct 9174 ATGTATTGACACATGAGCACTTGGTTCATTCCAATAAGCGAGACTGGCAATGCATCTGTT 9233 Query 24045 AGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTC 24104 | ||| ||||||||||| || || ||||| | ||| || | ||| ||| ||| Sbjct 9234 AAAAACTCTTGTTCAATGCTAACGGCTTCTGTGACAATG---CTCAAGATTTTTTC-CTC 9289 Query 24105 GG-TGGATA-CAATAAATGTT--TAAACATCAAACATGCGAAATCGCAGTGTAGACCCTC 24160 | ||| | | | | || |||||| || |||| | ||||| ||| || ||||| Sbjct 9290 TGATGGTTTTCTTTGCAGGTACCTAAACAACAGACATCCAAAATCTGTGTGAAGGCCCTC 9349 Query 24161 GTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAG 24220 ||| |||| || | |||||| || || || || || ||||| || || | || || | Sbjct 9350 GTCCCTACAGATAAGTTCGTTTGAGAATGTAAGGCCTGGCATGAGCCCTCTTTTCTTCAA 9409 Query 24221 CCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAAT 24280 ||| || |||| ||||| || || ||||| || | || || | | | || || ||| Sbjct 9410 CCAGAAGATGGCAGCAAAGGAGCCTGAAAAAAAGACACCCTCGATTACAGCGAATGCAGC 9469 Query 24281 AAGTCTTTCTCCATAACCGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTT 24337 ||| | |||||| | | ||| | || | |||||| ||| ||||| | ||| || Sbjct 9470 AAGACGCTCTCCAAAGCTGGCCTCCTTATCTTCTATCCATTTTAATGCCCATTGGGCTTT 9529 Query 24338 CTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACT--A 24395 | | | ||| || || | || | || || || || ||| | ||||| | || | Sbjct 9530 GCGTCTGATACAGGGAATGTTTTCAACTGCGTTGAAAAGGTAGCTCTTTTC--TGCTTCA 9587 Query 24396 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 24455 || |||| ||||| || ||||| || |||||||| || || || || || Sbjct 9588 TCCTTAATGTATGTGTCTATCAAGAGTGAGTACATTTCACTGTGGATATTCTCCATCATA 9647 Query 24456 ATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCT 24515 ||||| ||||||||||| | | || || | ||||| || ||| ||| ||| ||| Sbjct 9648 ATTTGGAATCCGTAGAAGCTACGTGCTTCTGGTATCTGAACCTCTTTACCAAA--GTTAA 9705 Query 24516 G--CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTA 24573 | | ||||||||||||||||||||| |||||||||||| |||| | ||||| | Sbjct 9706 AAACAAGATTTTCATTCACTATTCCGTCTGAGGCTGCAAAAAAGGCCAGAATGTGTTTGA 9765 Query 24574 TAAAATATTTTTC---GTC-TGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATA 24629 |||||||| |||| ||| | | ||| |||| | ||| | | ||||| | | || | Sbjct 9766 TAAAATATCTTTCATTGTCATTGAGTTTGTTT-TCCCAGTGCTCAATATCATGCGCTAGA 9824 Query 24630 TCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCA 24689 || || ||||| | ||||| || ||||| || |||||||| ||||| ||||| || ||| Sbjct 9825 TCAACCTCTTCGGCAGTCCAGAACGATGCTTCGGCCTTTTTGTACATGTTCCAAATCTCA 9884 Query 24690 TGATATTGAATTGGAAAAATAACAAATCTATTTGGATTT 24728 |||| |||||||| || |||||||| || || ||| Sbjct 9885 GTGTATTTGATTGGAAACATCACAAATCTGTTGGGGTTT 9923 >seq1894 Length=33155 Score = 129 bits (142), Expect = 7e-25 Identities = 601/944 (64%), Gaps = 15/944 (2%) Strand=Plus/Plus Query 53704 TGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTC 53763 ||| || ||||||| |||||| || || || || | || | | |||| | |||||| Sbjct 22242 TGCTATTGATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACTATCTC 22301 Query 53764 AGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 53823 || || | || || | ||| || || || | || || || || ||| |||| || Sbjct 22302 CGTACACAAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTGTTGCA 22361 Query 53824 CGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTT 53883 |||||| || || | ||| ||||||| || ||||| || || || |||| ||| || | Sbjct 22362 CGCATCTTTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATTGCATA 22421 Query 53884 CCAGACGACACGAGCCTTTATTATAGATTTGT--ATCTCTTTTCTCTTT-CGTATAGTGT 53940 ||| | |||| || | | | || | || | | ||| | ||| ||| Sbjct 22422 CCACAGTTGTTGAGCTGGTACTCTCTTTCTGGCGAGTCCTGGTGTATTTTCATATTTTGT 22481 Query 53941 ATACAATCGTTCAAACTCGTCTCCCCAAACAT-TGTCCAATCCAGGACATTCATCCGGAC 53999 |||| |||||||| |||||||| || | || || | | | ||| || | Sbjct 22482 GTACAGCTTCTCAAACTCATCTCCCCACACCTCTGAGAGATTTGGCGCCT-CATGTGGGC 22540 Query 54000 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 54059 | | | ||||| ||||||| ||| ||||| ||||| || ||||| |||||||| | Sbjct 22541 AAAATAGAGACCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGGGAATCCACA 22600 Query 54060 GAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 54118 | ||| || | ||| | | | | || || || || |||||| || ||| Sbjct 22601 TTCC-ATAGAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATTCTTCTTCAGACTA 22659 Query 54119 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGT 54178 ||||| | | | ||| | ||||| || ||||| ||||| | | | || || | Sbjct 22660 AGGAAATCAAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCACCTGGTCTC 22719 Query 54179 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 54238 |||||||| ||||| || | ||||| || || | || | || | || |||||| | Sbjct 22720 TTGTTTCCACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCATTGGTACT 22779 Query 54239 ATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATT---- 54294 | ||||| |||| ||||| || || | || || ||| |||| | || || Sbjct 22780 ACTCCATTAGATGTTCCATTTGTTCCTGCAATGTAAGATCCTGTGGCTCTGATGTTGTGT 22839 Query 54295 ACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 54354 || | | || || || || ||||| ||| || || | || || | |||| || Sbjct 22840 AC-ACTCAAT---CCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTTAGTGT 22895 Query 54355 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 54414 ||||||||| |||||||| |||||||| |||| || | ||| || || | ||| Sbjct 22896 ATCATAGATACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAGAGTTG 22955 Query 54415 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 54474 | || | ||||||| ||||||| || || || || || ||||| | || Sbjct 22956 TGGCCGGTTTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAATAGCCGCTGCGA 23015 Query 54475 AAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGAC 54534 | | || || || || || |||| || || || | || ||||| | ||| Sbjct 23016 CATCATGTTATATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCCAAGACTGAC 23075 Query 54535 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGA 54594 | ||| || | | ||| ||||| || || | ||| ||||| | ||| |||||| || Sbjct 23076 TCTCATCAAAAGATACTGTGGTCTCTCTACCACTTTGCCGTTTACTCTCAACAAGTATGA 23135 Query 54595 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 54638 || | ||||| ||||| ||||||||||| ||| |||| Sbjct 23136 GCGCTCGAGTGTTTTGAAACCGAAATAGTTGTACCCAAAATCTC 23179 >seq732 Length=14862 Score = 129 bits (142), Expect = 7e-25 Identities = 601/944 (64%), Gaps = 15/944 (2%) Strand=Plus/Plus Query 53704 TGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTC 53763 ||| || ||||||| |||||| || || || || | || | | |||| | |||||| Sbjct 8959 TGCTATTGATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACTATCTC 9018 Query 53764 AGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 53823 || || | || || | ||| || || || | || || || || ||| |||| || Sbjct 9019 CGTACACAAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTGTTGCA 9078 Query 53824 CGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTT 53883 |||||| || || | ||| ||||||| || ||||| || || || |||| ||| || | Sbjct 9079 CGCATCTTTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATTGCATA 9138 Query 53884 CCAGACGACACGAGCCTTTATTATAGATTTGT--ATCTCTTTTCTCTTT-CGTATAGTGT 53940 ||| | |||| || | | | || | || | | ||| | ||| ||| Sbjct 9139 CCACAGTTGTTGAGCTGGTACTCTCTTTCTGGCGAGTCCTGGTGTATTTTCATATTTTGT 9198 Query 53941 ATACAATCGTTCAAACTCGTCTCCCCAAACAT-TGTCCAATCCAGGACATTCATCCGGAC 53999 |||| |||||||| |||||||| || | || || | | | ||| || | Sbjct 9199 GTACAGCTTCTCAAACTCATCTCCCCACACCTCTGAGAGATTTGGCGCCT-CATGTGGGC 9257 Query 54000 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 54059 | | | ||||| ||||||| ||| ||||| ||||| || ||||| |||||||| | Sbjct 9258 AAAATAGAGACCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGGGAATCCACA 9317 Query 54060 GAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 54118 | ||| || | ||| | | | | || || || || |||||| || ||| Sbjct 9318 TTCC-ATAGAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATTCTTCTTCAGACTA 9376 Query 54119 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGT 54178 ||||| | | | ||| | ||||| || ||||| ||||| | | | || || | Sbjct 9377 AGGAAATCAAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCACCTGGTCTC 9436 Query 54179 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 54238 |||||||| ||||| || | ||||| || || | || | || | || |||||| | Sbjct 9437 TTGTTTCCACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCATTGGTACT 9496 Query 54239 ATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATT---- 54294 | ||||| |||| ||||| || || | || || ||| |||| | || || Sbjct 9497 ACTCCATTAGATGTTCCATTTGTTCCTGCAATGTAAGATCCTGTGGCTCTGATGTTGTGT 9556 Query 54295 ACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 54354 || | | || || || || ||||| ||| || || | || || | |||| || Sbjct 9557 AC-ACTCAAT---CCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTTAGTGT 9612 Query 54355 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 54414 ||||||||| |||||||| |||||||| |||| || | ||| || || | ||| Sbjct 9613 ATCATAGATACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAGAGTTG 9672 Query 54415 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 54474 | || | ||||||| ||||||| || || || || || ||||| | || Sbjct 9673 TGGCCGGTTTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAATAGCCGCTGCGA 9732 Query 54475 AAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGAC 54534 | | || || || || || |||| || || || | || ||||| | ||| Sbjct 9733 CATCATGTTATATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCCAAGACTGAC 9792 Query 54535 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGA 54594 | ||| || | | ||| ||||| || || | ||| ||||| | ||| |||||| || Sbjct 9793 TCTCATCAAAAGATACTGTGGTCTCTCTACCACTTTGCCGTTTACTCTCAACAAGTATGA 9852 Query 54595 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 54638 || | ||||| ||||| ||||||||||| ||| |||| Sbjct 9853 GCGCTCGAGTGTTTTGAAACCGAAATAGTTGTACCCAAAATCTC 9896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593707098349920