Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1084 84.2 2e-11 >seq1084 Length=6849 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 97003 AGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTC 97062 || ||||||||||| | ||| | ||| |||||| | |||||||| | || | | Sbjct 3955 AGAGTTGGGAAAGGATTTGGAATGCGCTCAAGCTGGATATTTAGAGCATCTACATGGTCC 4014 Query 97063 ACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAA--TCAGTGA 97120 | ||| | |||||||| || | | | ||| | || |||||| || || | || | Sbjct 4015 AAATACACATGAGCATCACCCATACAATAAATCAGTTTTCCAGG--CTTAAGGTTGGTTA 4072 Query 97121 CATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTC 97180 |||| || |||||| ||| ||||| | || |||||||||||||| || ||||| | Sbjct 4073 CATGAGCAATCATAATAGTCAATAGGGCGTAAGAGGCAATGTTAAAAGGAACGCCTAGGC 4132 Query 97181 CCATATCAGCTGATCTTTGATATAACTGACAGGAAAG 97217 | ||||| ||| | ||||| ||||| || || || Sbjct 4133 CTGTATCACATGAGCGCTGATAAAACTGGCAAGAGAG 4169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346775741555780