Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq182 102 6e-17 >seq182 Length=36121 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||| || ||||||||| ||||| |||||| || ||| |||| || Sbjct 35299 ACCAAGTGCAATGTAGACTCCTTCTGGATGTTATAGTCGGACAAAGTGCGTCCGTCTTCT 35240 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | ||||||||| || || ||||| || ||||| || || || | |||||||||||| Sbjct 35239 AATTGTTTTCCTGCAAAAATCAATCGTTGTTGATCTGGTGGAATTCCCTCCTTGTCCTGG 35180 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || |||||| | | | | || | ||| ||||| | ||| || ||||| Sbjct 35179 ATCTTAGCCTTAACATTTTCGATGGTATCGGAAGGCTCGACCTCAAGGGTGATGGTCTTA 35120 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| |||||| ||||| || ||||| Sbjct 35119 CCGGTCAAAGTCTTAACAAAAATCTGCAT 35091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395065791531034