Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1005 194 1e-44 seq1894 163 3e-35 seq732 163 3e-35 seq492 109 5e-19 >seq1005 Length=21531 Score = 194 bits (214), Expect = 1e-44 Identities = 568/870 (65%), Gaps = 9/870 (1%) Strand=Plus/Minus Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596 |||||||| |||||||| || |||| | || ||||||||||||||||||||||| ||| Sbjct 9913 AGATTTGTGATGTTTCCAATCAAATACACTGAGATTTGGAACATGTACAAAAAGGCCGAA 9854 Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGAT-CTGAGCGATTGGGATTC 57655 |||||||| ||||| | |||||| || || || | | ||| ||||| | ||||| Sbjct 9853 GCATCGTTCTGGACTGCCGAAGAGGTTGATCTAGCGCATGATATTGAGC-ACTGGGAAAA 9795 Query 57656 C---CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATC 57712 | ||||| || ||| ||| ||||||| |||||| | |||| ||||| || || || Sbjct 9794 CAAACTCAATGACAATGAAAGATATTTTATCAAACACATTCTGGCCTTTTTTGCAGCCTC 9735 Query 57713 CGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGA 57772 || || || || || || ||| | || | ||| |||| || || | | || Sbjct 9734 AGACGGAATAGTGAATGAAAATCTTGTTTTTAACTTTGGTAAAGAGGTTCAGATACCAGA 9675 Query 57773 GGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTC 57832 || | |||| |||||||| ||| | || || || | || |||||||| || Sbjct 9674 AGCACGTAGCTTCTACGGATTCCAAATTATGATGGAGAATATCCACAGTGAAATGTACTC 9615 Query 57833 GCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGAT 57892 || | || || || ||| | ||||| | | || || | || |||||||| | Sbjct 9614 ACTCTTGATAGACACATACATTAAGGATGAAGCAGAAAAGAGCTACCTTTTCAACGCAGT 9555 Query 57893 CGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGC 57952 |||| || ||| ||| || || | ||| || | ||||||||| || Sbjct 9554 TGAAAACATTCCCTGTATCAGACGCAAAGCCCAATGGGCATTAAAATGGATAGAAGATAA 9495 Query 57953 CACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTC 58012 ||||| || | ||| | || || ||||| | |||| ||| | || ||||| Sbjct 9494 GGAGGCCAGCTTTGGAGAGCGTCTTGCTGCATTCGCTGTAATCGAGGGTGTCTTTTTTTC 9435 Query 58013 GGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTT 58072 ||| |||||| || || || ||| |||||||| | || || ||||| ||||| || || Sbjct 9434 AGGCTCCTTTGCTGCCATCTTCTGGTTGAAGAAAAGAGGGCTCATGCCAGGCCTTACATT 9375 Query 58073 TAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTA 58132 ||||| | || | | |||||||| || || || ||||||| || || ||| Sbjct 9374 CTCAAACGAACTTATCTGTAGGGACGAGGGCCTTCACACAGATTTTGGATGTCTGTTGTT 9315 Query 58133 CTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGT 58192 || | | ||||| | ||| |||||| |||| |||| || || || Sbjct 9314 TAGGTACCTGCAAAGAAAACCATCAGAGGAAAAAATCTTGAGCATTGTCACAGAAGCCGT 9255 Query 58193 CGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAA 58252 || ||| | |||||| | || || || | || || | | | || |||||| | Sbjct 9254 TAGCATTGAACAAGAGTTTTTAACAGATGCATTGCCAGTCTCGCTTATTGGAATGAACCA 9195 Query 58253 TGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATT 58310 | | |||| | |||||||| ||||||||||| ||||| | | ||||| | || Sbjct 9194 AGTGCTCATGTGTCAATACATTGAATTTGTTGCCGATAGACTGCTAGTTGAACTTGGGTT 9135 Query 58311 GGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAG 58370 | | | || |||||||| | || || || |||||| || |||| || | || Sbjct 9134 GAACA--AACACTACAACACAACCAACCCATTCAGCTTTATGGATATGATTTCAATGCAG 9077 Query 58371 GGCAAGACAAACTTTTTCGaaaaaaaaGTT 58400 ||||| || ||||| || || || || ||| Sbjct 9076 GGCAAAACCAACTTCTTTGAGAAGAAGGTT 9047 >seq1894 Length=33155 Score = 163 bits (180), Expect = 3e-35 Identities = 605/934 (65%), Gaps = 27/934 (3%) Strand=Plus/Plus Query 23021 GCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCG 23080 || || || || | ||| || || ||||| ||||| | ||||| || || || || Sbjct 22243 GCTATTGATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACTATCTCC 22302 Query 23081 GTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCAC 23140 ||||| | ||||| | |||||| ||||||| || |||||| || | |||||| Sbjct 22303 GTACACAAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTGTTGCAC 22362 Query 23141 GAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGC 23200 | ||| ||||| | |||||| |||||||| || || | || || || | || || | Sbjct 22363 GCATCTTTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATTGCATAC 22422 Query 23201 CACA-TAGTCTGAGCGTGAACACG-----TCGCACGTACCTGCCTTCTTCCTCGTACTTT 23254 |||| | || ||||| | || | | || || |||| | || || || ||| Sbjct 22423 CACAGTTGT-TGAGCTGGTACTCTCTTTCTGGCGAGT-CCTGGTGTATTT-TCATATTTT 22479 Query 23255 TGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATC-GG 23313 ||||| | ||||| || | || | || | || |||| | ||| || Sbjct 22480 GTGTACAGCTTCTCAAACTCATCTCCCCACACCTCTGAGAGATTTGGCGCCT-CATGTGG 22538 Query 23314 ACACATGAGACTCCACATTGAGTCATTTTCAA--CGCGTCTCATAAAAAGATCCGGTATC 23371 || | ||| ||| | || ||| ||| | || |||| || ||||| || ||| Sbjct 22539 GCAAAATAGAGACCATTCTCCGT--TTTCCAAAACTCGCTTCATGAACAGATCGGGAATC 22596 Query 23372 CATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAA 23431 || | | ||||||| || || ||||| ||| || || ||| ||||| |||| | Sbjct 22597 CACATTCCATAGAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATTCTTCTTCAGA 22656 Query 23432 TCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGT 23491 | || || ||||| || || ||||| ||||| | || | ||||| || || ||| Sbjct 22657 CTAAGGAAATCAAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCACCTGGT 22716 Query 23492 CTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGC 23551 ||||| || || ||||| || || || | ||| || | |||| | || | ||||| || Sbjct 22717 CTCTTGTTTCCACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCATTGGT 22776 Query 23552 ACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTG 23611 || | || || || | || | || || | || ||| | |||| | |||| Sbjct 22777 ACTACTCCATTAGATGTTCCATTTGTTCCTGCAATGTAAGATCCTGTGGCTCTGATGTTG 22836 Query 23612 TGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTG 23671 || || || || || || || | ||||| |||||||| || || || || || || Sbjct 22837 TGTACACTCAATCCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTTAGTGTA 22896 Query 23672 TCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGC 23731 || ||||| ||||| ||||| || || | | || | ||| || ||||| || | ||| Sbjct 22897 TCATAGATACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAGAGTTG- 22955 Query 23732 GCTTTGGGCG--TAGCGGCCGAG---AACAGTGTCGGGCTGGCGTGCGTAAAGTATCCAT 23786 ||| || | | ||||| || ||||| || || || ||||| || || Sbjct 22956 ----TGGCCGGTTTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAA-TAGCCGC 23010 Query 23787 T-CGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATG 23845 | |||||| | || || || || || || || |||||||| ||||||||||| || | Sbjct 23011 TGCGACATCATGTTATATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCCAAGA 23070 Query 23846 GCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGA 23905 ||| | ||||| | || || |||||||| ||| |||||| | | | |||| Sbjct 23071 CTGACTCTCATCAAAAGATACTGTGGTCTCTCTACCACTTTGCCGTTTACTCTCAACAAG 23130 Query 23906 TATGAACGTTGCATCGTTTTAAATCCAAAATAGT 23939 ||||| || | | ||||| || || ||||||| Sbjct 23131 TATGAGCGCTCGAGTGTTTTGAAACCGAAATAGT 23164 >seq732 Length=14862 Score = 163 bits (180), Expect = 3e-35 Identities = 605/934 (65%), Gaps = 27/934 (3%) Strand=Plus/Plus Query 23021 GCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCG 23080 || || || || | ||| || || ||||| ||||| | ||||| || || || || Sbjct 8960 GCTATTGATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACTATCTCC 9019 Query 23081 GTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCAC 23140 ||||| | ||||| | |||||| ||||||| || |||||| || | |||||| Sbjct 9020 GTACACAAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTGTTGCAC 9079 Query 23141 GAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGC 23200 | ||| ||||| | |||||| |||||||| || || | || || || | || || | Sbjct 9080 GCATCTTTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATTGCATAC 9139 Query 23201 CACA-TAGTCTGAGCGTGAACACG-----TCGCACGTACCTGCCTTCTTCCTCGTACTTT 23254 |||| | || ||||| | || | | || || |||| | || || || ||| Sbjct 9140 CACAGTTGT-TGAGCTGGTACTCTCTTTCTGGCGAGT-CCTGGTGTATTT-TCATATTTT 9196 Query 23255 TGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATC-GG 23313 ||||| | ||||| || | || | || | || |||| | ||| || Sbjct 9197 GTGTACAGCTTCTCAAACTCATCTCCCCACACCTCTGAGAGATTTGGCGCCT-CATGTGG 9255 Query 23314 ACACATGAGACTCCACATTGAGTCATTTTCAA--CGCGTCTCATAAAAAGATCCGGTATC 23371 || | ||| ||| | || ||| ||| | || |||| || ||||| || ||| Sbjct 9256 GCAAAATAGAGACCATTCTCCGT--TTTCCAAAACTCGCTTCATGAACAGATCGGGAATC 9313 Query 23372 CATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAA 23431 || | | ||||||| || || ||||| ||| || || ||| ||||| |||| | Sbjct 9314 CACATTCCATAGAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATTCTTCTTCAGA 9373 Query 23432 TCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGT 23491 | || || ||||| || || ||||| ||||| | || | ||||| || || ||| Sbjct 9374 CTAAGGAAATCAAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCACCTGGT 9433 Query 23492 CTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGC 23551 ||||| || || ||||| || || || | ||| || | |||| | || | ||||| || Sbjct 9434 CTCTTGTTTCCACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCATTGGT 9493 Query 23552 ACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTG 23611 || | || || || | || | || || | || ||| | |||| | |||| Sbjct 9494 ACTACTCCATTAGATGTTCCATTTGTTCCTGCAATGTAAGATCCTGTGGCTCTGATGTTG 9553 Query 23612 TGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTG 23671 || || || || || || || | ||||| |||||||| || || || || || || Sbjct 9554 TGTACACTCAATCCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTTAGTGTA 9613 Query 23672 TCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGC 23731 || ||||| ||||| ||||| || || | | || | ||| || ||||| || | ||| Sbjct 9614 TCATAGATACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAGAGTTG- 9672 Query 23732 GCTTTGGGCG--TAGCGGCCGAG---AACAGTGTCGGGCTGGCGTGCGTAAAGTATCCAT 23786 ||| || | | ||||| || ||||| || || || ||||| || || Sbjct 9673 ----TGGCCGGTTTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAA-TAGCCGC 9727 Query 23787 T-CGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATG 23845 | |||||| | || || || || || || || |||||||| ||||||||||| || | Sbjct 9728 TGCGACATCATGTTATATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCCAAGA 9787 Query 23846 GCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGA 23905 ||| | ||||| | || || |||||||| ||| |||||| | | | |||| Sbjct 9788 CTGACTCTCATCAAAAGATACTGTGGTCTCTCTACCACTTTGCCGTTTACTCTCAACAAG 9847 Query 23906 TATGAACGTTGCATCGTTTTAAATCCAAAATAGT 23939 ||||| || | | ||||| || || ||||||| Sbjct 9848 TATGAGCGCTCGAGTGTTTTGAAACCGAAATAGT 9881 >seq492 Length=46864 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||||||||| ||| |||||||||| || || || |||| || || || || Sbjct 26915 ATGCAGATTTTCGTAAAAACTTTGACAGGCAAGACAATTACACTCGAGGTCGAGCCCTCA 26856 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| ||||| | ||| |||||||||||| | || || ||||| Sbjct 26855 GATACCATTGAAAACGTCAAGGCTAAAATCCAGGACAAGGAAGGGATTCCACCAGACCAA 26796 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||||| || ||||| || || || | ||||| | | | ||| | || ||||| Sbjct 26795 CAACGTCTCATCTTCGCAGGAAAGCAACTTGAAGA-TGGACGAACTCTTTCAGACTATAA 26737 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||| || ||||| || |||||||| | |||||| | ||| | || ||| Sbjct 26736 CATCCAGAAAGAGTCTACTCTTCACTTAGTACTTCGTCTGCGTGGTGGT 26688 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||||||||| ||| |||||||||| || || || |||| || || || || Sbjct 27143 ATGCAGATTTTCGTAAAAACTTTGACAGGCAAGACAATTACACTCGAGGTCGAGCCCTCA 27084 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| |||||| | || ||| |||||||| | || || ||||| Sbjct 27083 GATACCATTGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGAATTCCACCAGACCAA 27024 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGA---CTATGAGCGATTAT 31369 || ||||| || ||||| || || || | ||||| | | || || | | || ||| Sbjct 27023 CAACGTCTCATCTTCGCAGGAAAGCAACTTGAAGA-TGGACGAACCCTTTCA--GACTAT 26967 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || ||||| || |||||||| |||||||| | ||| | || |||| Sbjct 26966 AACATCCAGAAAGAGTCTACTCTTCACTTGGTACTTCGTCTGCGTGGTGGTA 26915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445755512155680