Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq182 98.7 8e-16 seq845 82.4 6e-11 seq462 82.4 6e-11 >seq182 Length=36121 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || |||||||| | | ||||| || | || |||||| || | || || |||||| Sbjct 35317 CCACCACGCAGACGGAGAACCAAGTGCAATGTAGACTCCTTCTGGATGTTATAGTCGGAC 35258 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || ||| |||| || |||||||| || |||||||||||||| |||||||| | || Sbjct 35257 AAAGTGCGTCCGTCTTCTAATTGTTTTCCTGCAAAAATCAATCGTTGTTGATCTGGTGGA 35198 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | || || || || |||| | || || | | | || ||| || |||||| Sbjct 35197 ATTCCCTCCTTGTCCTGGATCTTAGCCTTAACATTTTCGATGGTATCGGAAGGCTCGACC 35138 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || || ||||| | ||| || |||||||| ||||| Sbjct 35137 TCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACAAAAATCTGCAT 35091 >seq845 Length=10035 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | | |||||| || | ||| ||||||||| | || || || ||| Sbjct 5435 CCACCACGAAGGCGGAGCACCAAGTGCAAAGTAGACTCCTTTTGGATGTTATAGTCTGAC 5376 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 |||||||| | || || | ||| || || || ||||||||||| |||||||| | || Sbjct 5375 AATGTACGACCATCCTCGAGTTGCTTTCCTGCGAAAATCAATCGTTGTTGATCTGGTGGA 5316 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || |||| | ||||| | ||| || || | ||| || Sbjct 5315 ATTCCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATAGTATCTGAGGGCTCAACC 5256 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || | || || || || ||||| || || || || || || |||||| Sbjct 5255 TCGAGGGTAATTGTCTTACCGGTAAGTGTCTTTACGAAGATCTGCATT 5208 >seq462 Length=10693 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | | |||||| || | ||| ||||||||| | || || || ||| Sbjct 5463 CCACCACGAAGGCGGAGCACCAAGTGCAAAGTAGACTCCTTTTGGATGTTATAGTCTGAC 5404 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 |||||||| | || || | ||| || || || ||||||||||| |||||||| | || Sbjct 5403 AATGTACGACCATCCTCGAGTTGCTTTCCTGCGAAAATCAATCGTTGTTGATCTGGTGGA 5344 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || |||| | ||||| | ||| || || | ||| || Sbjct 5343 ATTCCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATAGTATCTGAGGGCTCAACC 5284 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || | || || || || ||||| || || || || || || |||||| Sbjct 5283 TCGAGGGTAATTGTCTTACCGGTAAGTGTCTTTACGAAGATCTGCATT 5236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381360517921332