Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1005 161 1e-34 >seq1005 Length=21531 Score = 161 bits (178), Expect = 1e-34 Identities = 577/881 (65%), Gaps = 41/881 (5%) Strand=Plus/Minus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 ||||||| |||| || ||| |||||| | |||||||||||||| | || || || | Sbjct 9903 TGTTTCCAATCAAATACACTGAGATTTGGAACATGTACAAAAAGGCCGAAGCATCGTTCT 9844 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||| | ||||||||| ||||| | | || | | | ||||| | | | || Sbjct 9843 GGACTGCCGAAGAGGTTGATCTAGCGCATGATATTGAGCACTGGGAAAACAAACTCAATG 9784 Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175 | | ||| || | ||||| |||||| ||||||| ||||| | ||| || ||||| | Sbjct 9783 ACAATGAAAGATATTTTATCAAACACATTCTGGCCTTTTTTGCAGCCTCAGACGGAATAG 9724 Query 125176 TCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT-G 125233 | || || ||||| ||| | || | ||||| | || ||||| | ||| | Sbjct 9723 TGAATGAAAATCTTGTTTTTAACTTTGG-TAAAGAGGTTCAGATACCAGAAGCA-CGTAG 9666 Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACAC-TGA 125292 ||| |||||||||||||| ||||| ||||| | ||| ||||||||||| || | ||| Sbjct 9665 CTTCTACGGATTCCAAATTATGATGGAGAATATCCACAGTGAAATGTACTC-ACTCTTGA 9607 Query 125293 TTGACATGTACATTCGCGAT-CCGCAACGTAAACA-CATGCTCTTTAACGCAATCGACAC 125350 | |||| |||||| ||| ||| | ||| | | || || |||||| | || | Sbjct 9606 TAGACACATACATTAAGGATGAAGCA--GAAAAGAGCTACCTTTTCAACGCAGTTGAAAA 9549 Query 125351 GGTGCCGTCTAT---ACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAA 125407 | || | ||| ||| ||| || ||||||| | ||||| || || | | Sbjct 9548 CATTCCCTGTATCAGACGCAAA---GCCCAATGGGCATTAAAATGGATAGAAGATAAGGA 9492 Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467 | | | | || | || | |||||||| | | ||||| |||| ||||| || Sbjct 9491 GGCCAGCTTTGGAGAGCGTCTTGCTGCATTCGCTGTAATCGAGGGTGTCTTTTTTTCAGG 9432 Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527 ||||| |||||||| ||| | ||||| | || |||||||| || || || | Sbjct 9431 CTCCTTTGCTGCCATCTTCTGGTTGAAGAAAAGAGGGCTCATGCCAGGCCTTACATTCTC 9372 Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCG 125587 ||||| |||| | | | ||||||||||| ||| || |||| ||| ||||| Sbjct 9371 AAACGAACTTATCTGTAGGGACGAGGGCCTTCACACAGATTTTGGATGTCTGTTGTTT-- 9314 Query 125588 CAACTATCTGCGTCCCGAGTGCAGATCCAGC-GATGAAAAGGTCATCAACATTGTAACCG 125646 | || ||| | || | | ||| | || ||||| || | | |||||| || | Sbjct 9313 -AGGTACCTG----CAAAG---AAAACCATCAGAGGAAAAAATCTTGAGCATTGTCACAG 9262 Query 125647 ATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCA 125706 | ||||| || || |||||||||||| |||| || | | || ||| | ||||| | Sbjct 9261 AAGCCGTTAGCATTGAACAAGAGTTTTTAACAGATGCATTGCCAGTCTCGCTTATTGGAA 9202 Query 125707 TGAACTGCAA--GCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGA 125764 ||||| ||| ||| ||||| | ||||| || ||||| || ||| | |||| | | Sbjct 9201 TGAAC--CAAGTGCTCATGTGTCAATACATTGAATTTGTTGCCGATAG---ACTG--CTA 9149 Query 125765 GTTGA--TTGG---CCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGC 125819 ||||| |||| ||| |||||| | | || || || || ||| | Sbjct 9148 GTTGAACTTGGGTTGAACAAACACTACAACACAACCAACCCATTCAGCTTTATGGATATG 9089 Query 125820 ATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGT 125860 || ||| | |||| || |||||||| || ||||||||||| Sbjct 9088 ATTTCAATGCAGGGCAAAACCAACTTCTTTGAGAAGAAGGT 9048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741041099629040