Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq845 125 6e-24 seq462 125 6e-24 seq182 113 4e-20 >seq845 Length=10035 Score = 125 bits (138), Expect = 6e-24 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 |||||||||||||||||| |||||||| | |||||| || | | | ||| || |||| Sbjct 5418 CACCAAGTGCAAAGTAGACTCCTTTTGGATGTTATAGTC--TGACAATGTACGACCATCC 5361 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || || || ||||| | || || |||| ||| |||||||| ||||| ||||| ||||| Sbjct 5360 TCGAGTTGCTTTCCTGCGAAAATCAATCGTTGTTGATCTGGTGGAATTCCTTCCTTGTCC 5301 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || ||||||||||| | | ||| || | | | || || || | || || || Sbjct 5300 TGGATCTTTGCCTTGACATTTTCAATAGTATCTGAGGGCTCAACCTCGAGGGTAATTGTC 5241 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 || || ||||| || || || ||||||||||| || Sbjct 5240 TTACCGGTAAGTGTCTTTACGAAGATCTGCATTCT 5206 >seq462 Length=10693 Score = 125 bits (138), Expect = 6e-24 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 |||||||||||||||||| |||||||| | |||||| || | | | ||| || |||| Sbjct 5446 CACCAAGTGCAAAGTAGACTCCTTTTGGATGTTATAGTC--TGACAATGTACGACCATCC 5389 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || || || ||||| | || || |||| ||| |||||||| ||||| ||||| ||||| Sbjct 5388 TCGAGTTGCTTTCCTGCGAAAATCAATCGTTGTTGATCTGGTGGAATTCCTTCCTTGTCC 5329 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || ||||||||||| | | ||| || | | | || || || | || || || Sbjct 5328 TGGATCTTTGCCTTGACATTTTCAATAGTATCTGAGGGCTCAACCTCGAGGGTAATTGTC 5269 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 || || ||||| || || || ||||||||||| || Sbjct 5268 TTACCGGTAAGTGTCTTTACGAAGATCTGCATTCT 5234 >seq182 Length=36121 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||||||||| ||||| ||||| || | |||||| ||| || |||| || || Sbjct 35299 ACCAAGTGCAATGTAGACTCCTTCTGGATGTTATAGTCGGACAAAGTGCGTCCGTCTTCT 35240 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | |||||||| |||| || |||| ||| |||||||| ||||| || || ||||| | Sbjct 35239 AATTGTTTTCCTGCAAAAATCAATCGTTGTTGATCTGGTGGAATTCCCTCCTTGTCCTGG 35180 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| || ||| || || | | ||||| |||| |||||||| || Sbjct 35179 ATCTTAGCCTTAACATTTTCGATGGTATCGGAAGGCTCGACCTCAAGGGTGATGGTCTTA 35120 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 || || | ||| || ||||| |||||||| || Sbjct 35119 CCGGTCAAAGTCTTAACAAAAATCTGCATCCT 35088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448280250487440