Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1005 262 5e-65 seq1894 138 1e-27 seq732 138 1e-27 >seq1005 Length=21531 Score = 262 bits (290), Expect = 5e-65 Identities = 596/881 (68%), Gaps = 24/881 (3%) Strand=Plus/Plus Query 33034 TTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 33093 || || || || || ||||| || | || ||| || | ||||| || || || ||| Sbjct 9054 TTCTCAAAGAAGTTGGTTTTGCCCTGCATTGAAATCATATCCATAAAGCTGAATGGGTTG 9113 Query 33094 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCT 33153 || || || ||| || || || | |||| | || |||||| || || ||||| Sbjct 9114 GTTGTGTTGTAGTGTTTGTTCAACCCAAGTTCAACTAGCAGTCTATCGGCAACAAATTCA 9173 Query 33154 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTA 33213 || ||| ||| | | |||||||| ||||| ||||| | || | || Sbjct 9174 ATGTATTGACACATGAGCACTTGGTTCATTCCAATAAGCGAGACTGGCAATGCATCTGTT 9233 Query 33214 AGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTC 33273 | ||| |||||||||||| || || ||||| | ||| || | | ||| ||| ||| Sbjct 9234 AAAAACTCTTGTTCAATGCTAACGGCTTCTGTGACAATG---CTCAAGATTTTTTC-CTC 9289 Query 33274 GG-TGGATG-CAATAAATGTT--TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTC 33329 | ||| | | | | || |||||| || |||| | ||||| ||| || ||||| Sbjct 9290 TGATGGTTTTCTTTGCAGGTACCTAAACAACAGACATCCAAAATCTGTGTGAAGGCCCTC 9349 Query 33330 GTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAG 33389 ||| |||| || |||||||| || || || || || ||||| || || | || || | Sbjct 9350 GTCCCTACAGATAAGTTCGTTTGAGAATGTAAGGCCTGGCATGAGCCCTCTTTTCTTCAA 9409 Query 33390 CCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAAT 33449 ||| || |||| ||| || || || ||||| |||| || || | | |||| || ||| Sbjct 9410 CCAGAAGATGGCAGCAAAGGAGCCTGAAAAAAAGACACCCTCGATTACAGCGAATGCAGC 9469 Query 33450 AAGTCTCTCTCCATAACCGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTT 33506 ||| | ||||||| | | ||| | || | |||||| ||| ||||| | ||| || Sbjct 9470 AAGACGCTCTCCAAAGCTGGCCTCCTTATCTTCTATCCATTTTAATGCCCATTGGGCTTT 9529 Query 33507 CTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACT--A 33564 | | | ||| || || |||| | || || || || ||| | ||||| | || | Sbjct 9530 GCGTCTGATACAGGGAATGTTTTCAACTGCGTTGAAAAGGTAGCTCTTTTC--TGCTTCA 9587 Query 33565 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 33624 || |||| || || || ||||| || |||||||| || || || || || Sbjct 9588 TCCTTAATGTATGTGTCTATCAAGAGTGAGTACATTTCACTGTGGATATTCTCCATCATA 9647 Query 33625 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCC 33684 || || ||||||||||| | | || || | ||||| || ||| ||| ||| ||| Sbjct 9648 ATTTGGAATCCGTAGAAGCTACGTGCTTCTGGTATCTGAACCTCTTTACCAAA--GTTAA 9705 Query 33685 GC-CAA-ATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTA 33742 ||| ||||||||||||||||||||| |||||||||||| |||| | ||||| | Sbjct 9706 AAACAAGATTTTCATTCACTATTCCGTCTGAGGCTGCAAAAAAGGCCAGAATGTGTTTGA 9765 Query 33743 TAAAATATTTTTC---GTC-TGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATA 33798 |||||||| |||| ||| | | ||| |||| | ||| | | ||||| | | || | Sbjct 9766 TAAAATATCTTTCATTGTCATTGAGTTTGTTT-TCCCAGTGCTCAATATCATGCGCTAGA 9824 Query 33799 TCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCA 33858 || || ||||| | ||||| || ||||| || |||||||| ||||||||||| || ||| Sbjct 9825 TCAACCTCTTCGGCAGTCCAGAACGATGCTTCGGCCTTTTTGTACATGTTCCAAATCTCA 9884 Query 33859 TAATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGG 33899 |||| |||||| || || |||||||| || || ||||| Sbjct 9885 GTGTATTTGATTGGAAACATCACAAATCTGTTGGGGTTTGG 9925 >seq1894 Length=33155 Score = 138 bits (152), Expect = 1e-27 Identities = 601/939 (64%), Gaps = 19/939 (2%) Strand=Plus/Plus Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957 ||||||| |||||| || || || || | || | | |||| | |||||| || || Sbjct 22249 GATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACTATCTCCGTACAC 22308 Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017 | || || | ||| || || || | || || || || ||| |||| |||||||| Sbjct 22309 AAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTGTTGCACGCATCT 22368 Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63077 || || | ||| |||| || || ||||| || || || |||| ||| || | ||| | Sbjct 22369 TTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATTGCATACCACAGT 22428 Query 63078 ACTCGAGCCTTTATTATAGATTTGTATC---TCCTT-TCTCTTT-CGTATAGTGTATACA 63132 | |||| || | | ||| | | |||| | | ||| | ||| ||| |||| Sbjct 22429 TGTTGAGCTGGTACTCTC--TTTCTGGCGAGTCCTGGTGTATTTTCATATTTTGTGTACA 22486 Query 63133 ATCGTTCGAACTCGTCTCCCCAAACAT-TGTCCAATCCAGGACATTCATCCGGACACATC 63191 || ||||| |||||||| || | || || | | | ||| || || | Sbjct 22487 GCTTCTCAAACTCATCTCCCCACACCTCTGAGAGATTTGGCGCCT-CATGTGGGCAAAAT 22545 Query 63192 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 63251 | ||||| ||||||| ||| ||||| ||||| || ||||| |||||||| | | Sbjct 22546 AGAGACCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGGGAATCCACATTCC- 22604 Query 63252 ATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310 ||| || | ||| | | | | || || || || |||||| || ||| ||||| Sbjct 22605 ATAGAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATTCTTCTTCAGACTAAGGAA 22664 Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370 | | | ||| | ||||| || ||||| ||||| || | | || || | ||||| Sbjct 22665 ATCAAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCACCTGGTCTCTTGTT 22724 Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 ||| ||||| || | ||||| || || | || | || | || |||||| | | || Sbjct 22725 TCCACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCATTGGTACTACTCC 22784 Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATT----ACTAA 63486 || ||| | ||||| || || | || || ||| |||| | || || || | Sbjct 22785 ATTAGATGTTCCATTTGTTCCTGCAATGTAAGATCCTGTGGCTCTGATGTTGTGTAC-AC 22843 Query 63487 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCAT 63546 | || || ||||| ||||| ||| || || | || || | |||| || |||| Sbjct 22844 TCAAT---CCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTTAGTGTATCAT 22900 Query 63547 AGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 63606 |||||||||||||||||||||| |||| || | ||| || || | ||| | | Sbjct 22901 AGATACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAGAGTTGTGGCC 22960 Query 63607 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTA 63666 | | ||||||| ||||||| || || || || || ||||| | || | | Sbjct 22961 GGTTTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAATAGCCGCTGCGACATCA 23020 Query 63667 GATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCA 63726 || || || || || |||| || || || | || ||||| | ||| | || Sbjct 23021 TGTTATATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCCAAGACTGACTCTCA 23080 Query 63727 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTT 63786 | || | | ||| ||||| || || | ||| ||||| | |||||||||| || | Sbjct 23081 TCAAAAGATACTGTGGTCTCTCTACCACTTTGCCGTTTACTCTCAACAAGTATGAGCGCT 23140 Query 63787 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63825 | | ||||| ||||| ||||||||||| ||| |||| Sbjct 23141 CGAGTGTTTTGAAACCGAAATAGTTGTACCCAAAATCTC 23179 >seq732 Length=14862 Score = 138 bits (152), Expect = 1e-27 Identities = 601/939 (64%), Gaps = 19/939 (2%) Strand=Plus/Plus Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957 ||||||| |||||| || || || || | || | | |||| | |||||| || || Sbjct 8966 GATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACTATCTCCGTACAC 9025 Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017 | || || | ||| || || || | || || || || ||| |||| |||||||| Sbjct 9026 AAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTGTTGCACGCATCT 9085 Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63077 || || | ||| |||| || || ||||| || || || |||| ||| || | ||| | Sbjct 9086 TTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATTGCATACCACAGT 9145 Query 63078 ACTCGAGCCTTTATTATAGATTTGTATC---TCCTT-TCTCTTT-CGTATAGTGTATACA 63132 | |||| || | | ||| | | |||| | | ||| | ||| ||| |||| Sbjct 9146 TGTTGAGCTGGTACTCTC--TTTCTGGCGAGTCCTGGTGTATTTTCATATTTTGTGTACA 9203 Query 63133 ATCGTTCGAACTCGTCTCCCCAAACAT-TGTCCAATCCAGGACATTCATCCGGACACATC 63191 || ||||| |||||||| || | || || | | | ||| || || | Sbjct 9204 GCTTCTCAAACTCATCTCCCCACACCTCTGAGAGATTTGGCGCCT-CATGTGGGCAAAAT 9262 Query 63192 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 63251 | ||||| ||||||| ||| ||||| ||||| || ||||| |||||||| | | Sbjct 9263 AGAGACCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGGGAATCCACATTCC- 9321 Query 63252 ATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310 ||| || | ||| | | | | || || || || |||||| || ||| ||||| Sbjct 9322 ATAGAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATTCTTCTTCAGACTAAGGAA 9381 Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370 | | | ||| | ||||| || ||||| ||||| || | | || || | ||||| Sbjct 9382 ATCAAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCACCTGGTCTCTTGTT 9441 Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 ||| ||||| || | ||||| || || | || | || | || |||||| | | || Sbjct 9442 TCCACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCATTGGTACTACTCC 9501 Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATT----ACTAA 63486 || ||| | ||||| || || | || || ||| |||| | || || || | Sbjct 9502 ATTAGATGTTCCATTTGTTCCTGCAATGTAAGATCCTGTGGCTCTGATGTTGTGTAC-AC 9560 Query 63487 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCAT 63546 | || || ||||| ||||| ||| || || | || || | |||| || |||| Sbjct 9561 TCAAT---CCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTTAGTGTATCAT 9617 Query 63547 AGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 63606 |||||||||||||||||||||| |||| || | ||| || || | ||| | | Sbjct 9618 AGATACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAGAGTTGTGGCC 9677 Query 63607 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTA 63666 | | ||||||| ||||||| || || || || || ||||| | || | | Sbjct 9678 GGTTTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAATAGCCGCTGCGACATCA 9737 Query 63667 GATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCA 63726 || || || || || |||| || || || | || ||||| | ||| | || Sbjct 9738 TGTTATATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCCAAGACTGACTCTCA 9797 Query 63727 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTT 63786 | || | | ||| ||||| || || | ||| ||||| | |||||||||| || | Sbjct 9798 TCAAAAGATACTGTGGTCTCTCTACCACTTTGCCGTTTACTCTCAACAAGTATGAGCGCT 9857 Query 63787 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63825 | | ||||| ||||| ||||||||||| ||| |||| Sbjct 9858 CGAGTGTTTTGAAACCGAAATAGTTGTACCCAAAATCTC 9896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622931984514640