Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq492 100 2e-16 seq845 91.5 1e-13 seq462 91.5 1e-13 >seq492 Length=46864 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | ||||||||||| || || || || | ||||| |||| |||||| | Sbjct 27375 CAATATGCAGATTTTTGTAAAAACCTTGACAGGCAAGACAATTACACTCGAGGTCGAGCC 27316 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | || ||||| || | |||||| |||||| || || ||||| || || || || Sbjct 27315 CTCAGATACCATTGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGAATTCCACCAGA 27256 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||||| | || || | || || |||||||| ||||||| ||| | | || || Sbjct 27255 CCAACAACGTCTTATCTTCGCAGGAAAGCAACTTGAAGATGGACGAACCCTTTCAGACTA 27196 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||| || ||||| ||||| |||| || || Sbjct 27195 TAACATCCAGAAAGAGTCTACTCTTCACTTGGT 27163 >seq845 Length=10035 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || ||||| ||| | || || || | |||||| |||| || ||| || Sbjct 5208 AATGCAGATCTTCGTAAAGACACTTACCGGTAAGACAATTACCCTCGAGGTTGAGCCCTC 5267 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | ||||| |||||| ||||| ||||| || || || ||||| Sbjct 5268 AGATACTATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGAATTCCACCAGATCA 5327 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG--AAACGTCAGCGATTAT 24167 ||| || |||||| || || ||||||||||| |||| | | |||| || ||| Sbjct 5328 ACAACGATTGATTTTCGCAGGAAAGCAACTCGAGGATGGTCGTACATTGTCA--GACTAT 5385 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||| ||||| || ||||| | || || ||| Sbjct 5386 AACATCCAAAAGGAGTCTACTTTGCACTTGGTG 5418 >seq462 Length=10693 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || ||||| ||| | || || || | |||||| |||| || ||| || Sbjct 5236 AATGCAGATCTTCGTAAAGACACTTACCGGTAAGACAATTACCCTCGAGGTTGAGCCCTC 5295 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | ||||| |||||| ||||| ||||| || || || ||||| Sbjct 5296 AGATACTATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGAATTCCACCAGATCA 5355 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG--AAACGTCAGCGATTAT 24167 ||| || |||||| || || ||||||||||| |||| | | |||| || ||| Sbjct 5356 ACAACGATTGATTTTCGCAGGAAAGCAACTCGAGGATGGTCGTACATTGTCA--GACTAT 5413 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||| ||||| || ||||| | || || ||| Sbjct 5414 AACATCCAAAAGGAGTCTACTTTGCACTTGGTG 5446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429925761342870