Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1005 250 3e-61 seq1894 145 1e-29 seq732 145 1e-29 >seq1005 Length=21531 Score = 250 bits (276), Expect = 3e-61 Identities = 591/879 (67%), Gaps = 24/879 (3%) Strand=Plus/Plus Query 32391 TTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTG 32450 || || || || || ||||| || | | ||| || | ||||| || |||||| ||| Sbjct 9054 TTCTCAAAGAAGTTGGTTTTGCCCTGCATTGAAATCATATCCATAAAGCTGAATGGGTTG 9113 Query 32451 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCT 32510 || || || ||| || || || | |||| | || |||||| || |||||||| Sbjct 9114 GTTGTGTTGTAGTGTTTGTTCAACCCAAGTTCAACTAGCAGTCTATCGGCAACAAATTCA 9173 Query 32511 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA 32570 || ||| ||| | | |||||||| ||||| ||||| | || | || Sbjct 9174 ATGTATTGACACATGAGCACTTGGTTCATTCCAATAAGCGAGACTGGCAATGCATCTGTT 9233 Query 32571 AGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTC 32630 | ||| ||||||||||| || || ||||| | ||| || | ||| ||| ||| Sbjct 9234 AAAAACTCTTGTTCAATGCTAACGGCTTCTGTGACAATG---CTCAAGATTTTTTC-CTC 9289 Query 32631 GG-TGGATA-CAATAAATGTT--TAAACATCAAACATGCGAAATCGCAGTGTAGACCCTC 32686 | ||| | | | | || |||||| || |||| | ||||| ||| || ||||| Sbjct 9290 TGATGGTTTTCTTTGCAGGTACCTAAACAACAGACATCCAAAATCTGTGTGAAGGCCCTC 9349 Query 32687 GTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAG 32746 ||| |||| || | |||||| || || || || || ||||| || || | || || | Sbjct 9350 GTCCCTACAGATAAGTTCGTTTGAGAATGTAAGGCCTGGCATGAGCCCTCTTTTCTTCAA 9409 Query 32747 CCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAAT 32806 ||| || |||| ||||| || || ||||| || | || || | | | || || ||| Sbjct 9410 CCAGAAGATGGCAGCAAAGGAGCCTGAAAAAAAGACACCCTCGATTACAGCGAATGCAGC 9469 Query 32807 AAGTCTCTCTCCATAACCGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTT 32863 ||| | ||||||| | | ||| | || | |||||| ||| ||||| | ||| || Sbjct 9470 AAGACGCTCTCCAAAGCTGGCCTCCTTATCTTCTATCCATTTTAATGCCCATTGGGCTTT 9529 Query 32864 CTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACT--A 32921 | | | ||| || || | || | || || || || ||| | ||||| | || | Sbjct 9530 GCGTCTGATACAGGGAATGTTTTCAACTGCGTTGAAAAGGTAGCTCTTTTC--TGCTTCA 9587 Query 32922 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 32981 || |||| ||||| || ||||| || |||||||| || || || || || Sbjct 9588 TCCTTAATGTATGTGTCTATCAAGAGTGAGTACATTTCACTGTGGATATTCTCCATCATA 9647 Query 32982 ATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCT 33041 ||||| ||||||||||||| | || || | ||||| || ||| ||| ||| ||| Sbjct 9648 ATTTGGAATCCGTAGAAGCTACGTGCTTCTGGTATCTGAACCTCTTTACCAAA--GTTAA 9705 Query 33042 G--CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTA 33099 | | ||||||||||||||||||||| |||||||||||| |||| | ||||| | Sbjct 9706 AAACAAGATTTTCATTCACTATTCCGTCTGAGGCTGCAAAAAAGGCCAGAATGTGTTTGA 9765 Query 33100 TAAAATATTTTTC---GTC-TGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATA 33155 |||||||| |||| ||| | | ||| |||| | ||| | | ||||| | | || | Sbjct 9766 TAAAATATCTTTCATTGTCATTGAGTTTGTTT-TCCCAGTGCTCAATATCATGCGCTAGA 9824 Query 33156 TCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCA 33215 || || ||||| | ||||| || ||||| || |||||||| ||||| ||||| || ||| Sbjct 9825 TCAACCTCTTCGGCAGTCCAGAACGATGCTTCGGCCTTTTTGTACATGTTCCAAATCTCA 9884 Query 33216 TGATATTGAATTGGAAAAATAACAAATCTATTTGGATTT 33254 |||| |||||||| || |||||||| || || ||| Sbjct 9885 GTGTATTTGATTGGAAACATCACAAATCTGTTGGGGTTT 9923 >seq1894 Length=33155 Score = 145 bits (160), Expect = 1e-29 Identities = 598/936 (64%), Gaps = 13/936 (1%) Strand=Plus/Plus Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62812 ||||||| |||||| || || || || | || | | |||| | |||||| || || Sbjct 22249 GATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACTATCTCCGTACAC 22308 Query 62813 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 62872 | || || | ||| || || || | || || || || ||| |||| |||||||| Sbjct 22309 AAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTGTTGCACGCATCT 22368 Query 62873 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 62932 || || | ||| |||| || || ||||| || || || |||| ||| || | ||| | Sbjct 22369 TTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATTGCATACCACAGT 22428 Query 62933 ACTCGAGCCTTTATTATAGATTTGT--ATCTCTTTTCTCTTT-CGTATAGTGTATACAAT 62989 | |||| || | | | || | || | | ||| | ||| ||| |||| Sbjct 22429 TGTTGAGCTGGTACTCTCTTTCTGGCGAGTCCTGGTGTATTTTCATATTTTGTGTACAGC 22488 Query 62990 CGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAAC 63049 || ||||| |||||||| || | || || |||| || || | | Sbjct 22489 TTCTCAAACTCATCTCCCCACACCTCTGAGAGATTTGGCGCCTCATGTGGGCAAAATAGA 22548 Query 63050 GACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 63109 ||||| ||||||| ||| ||||| ||||| || ||||| |||||||| | | ||| Sbjct 22549 GACCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGGGAATCCACATTCC-ATA 22607 Query 63110 -AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 63168 || | ||| | | | | || || || || |||||| || ||| ||||| | Sbjct 22608 GAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATTCTTCTTCAGACTAAGGAAATC 22667 Query 63169 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCC 63228 | | ||| | ||||| || ||||| ||||| || | | || || | |||||||| Sbjct 22668 AAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCACCTGGTCTCTTGTTTCC 22727 Query 63229 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 63288 ||||| || | ||||| || || | || | || | || |||||| | | ||||| Sbjct 22728 ACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCATTGGTACTACTCCATT 22787 Query 63289 GGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATT----ACTAATTG 63344 ||||| ||||| || |||| || || ||| |||| | || || || | | Sbjct 22788 AGATGTTCCATTTGTTCCTGCAATGTAAGATCCTGTGGCTCTGATGTTGTGTAC-ACTCA 22846 Query 63345 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 63404 || || ||||| ||||| ||| || || | || || | |||| |||||||||| Sbjct 22847 AT---CCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTTAGTGTATCATAGA 22903 Query 63405 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 63464 | |||||||| |||||||| |||| || | ||| || || | ||| | || Sbjct 22904 TACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAGAGTTGTGGCCGGT 22963 Query 63465 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGAT 63524 | ||||||| ||||||| || || || || || ||||| | || | | | Sbjct 22964 TTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAATAGCCGCTGCGACATCATGT 23023 Query 63525 TGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTA 63584 | || || || || |||| || || || | || ||||| | ||| | ||| | Sbjct 23024 TATATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCCAAGACTGACTCTCATCA 23083 Query 63585 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63644 | | | ||| ||||| || || | ||| ||||| | |||||||||| || || | Sbjct 23084 AAAGATACTGTGGTCTCTCTACCACTTTGCCGTTTACTCTCAACAAGTATGAGCGCTCGA 23143 Query 63645 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63680 ||||| ||||| ||||||||||| ||| |||| Sbjct 23144 GTGTTTTGAAACCGAAATAGTTGTACCCAAAATCTC 23179 >seq732 Length=14862 Score = 145 bits (160), Expect = 1e-29 Identities = 598/936 (64%), Gaps = 13/936 (1%) Strand=Plus/Plus Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62812 ||||||| |||||| || || || || | || | | |||| | |||||| || || Sbjct 8966 GATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACTATCTCCGTACAC 9025 Query 62813 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 62872 | || || | ||| || || || | || || || || ||| |||| |||||||| Sbjct 9026 AAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTGTTGCACGCATCT 9085 Query 62873 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 62932 || || | ||| |||| || || ||||| || || || |||| ||| || | ||| | Sbjct 9086 TTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATTGCATACCACAGT 9145 Query 62933 ACTCGAGCCTTTATTATAGATTTGT--ATCTCTTTTCTCTTT-CGTATAGTGTATACAAT 62989 | |||| || | | | || | || | | ||| | ||| ||| |||| Sbjct 9146 TGTTGAGCTGGTACTCTCTTTCTGGCGAGTCCTGGTGTATTTTCATATTTTGTGTACAGC 9205 Query 62990 CGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAAC 63049 || ||||| |||||||| || | || || |||| || || | | Sbjct 9206 TTCTCAAACTCATCTCCCCACACCTCTGAGAGATTTGGCGCCTCATGTGGGCAAAATAGA 9265 Query 63050 GACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 63109 ||||| ||||||| ||| ||||| ||||| || ||||| |||||||| | | ||| Sbjct 9266 GACCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGGGAATCCACATTCC-ATA 9324 Query 63110 -AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 63168 || | ||| | | | | || || || || |||||| || ||| ||||| | Sbjct 9325 GAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATTCTTCTTCAGACTAAGGAAATC 9384 Query 63169 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCC 63228 | | ||| | ||||| || ||||| ||||| || | | || || | |||||||| Sbjct 9385 AAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCACCTGGTCTCTTGTTTCC 9444 Query 63229 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 63288 ||||| || | ||||| || || | || | || | || |||||| | | ||||| Sbjct 9445 ACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCATTGGTACTACTCCATT 9504 Query 63289 GGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATT----ACTAATTG 63344 ||||| ||||| || |||| || || ||| |||| | || || || | | Sbjct 9505 AGATGTTCCATTTGTTCCTGCAATGTAAGATCCTGTGGCTCTGATGTTGTGTAC-ACTCA 9563 Query 63345 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 63404 || || ||||| ||||| ||| || || | || || | |||| |||||||||| Sbjct 9564 AT---CCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTTAGTGTATCATAGA 9620 Query 63405 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 63464 | |||||||| |||||||| |||| || | ||| || || | ||| | || Sbjct 9621 TACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAGAGTTGTGGCCGGT 9680 Query 63465 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGAT 63524 | ||||||| ||||||| || || || || || ||||| | || | | | Sbjct 9681 TTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAATAGCCGCTGCGACATCATGT 9740 Query 63525 TGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTA 63584 | || || || || |||| || || || | || ||||| | ||| | ||| | Sbjct 9741 TATATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCCAAGACTGACTCTCATCA 9800 Query 63585 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63644 | | | ||| ||||| || || | ||| ||||| | |||||||||| || || | Sbjct 9801 AAAGATACTGTGGTCTCTCTACCACTTTGCCGTTTACTCTCAACAAGTATGAGCGCTCGA 9860 Query 63645 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63680 ||||| ||||| ||||||||||| ||| |||| Sbjct 9861 GTGTTTTGAAACCGAAATAGTTGTACCCAAAATCTC 9896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633616523538400