Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq182 116 3e-21 seq492 98.7 9e-16 >seq182 Length=36121 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||||||||| ||||||| | || || ||| | || Sbjct 35091 ATGCAGATTTTTGTTAAGACTTTGACCGGTAAGACCATCACCCTTGAGGTCGAGCCTTCC 35150 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| | ||| || ||| ||||| || || |||||||| || ||| Sbjct 35151 GATACCATCGAAAATGTTAAGGCTAAGATCCAGGACAAGGAGGGAATTCCACCAGATCAA 35210 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | |||||||| || |||||||||||||| | |||||| || ||| || || Sbjct 35211 CAACGATTGATTTTTGCAGGAAAACAATTAGAAGACGGACGCACTTTGTCCGACTATAAC 35270 Query 25179 ATTCAAAAAGAATCCAC 25195 || || || || || || Sbjct 35271 ATCCAGAAGGAGTCTAC 35287 >seq492 Length=46864 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || ||||| |||||||| || || | || ||| |||| || ||| | || Sbjct 26915 ATGCAGATTTTCGTAAAAACTTTGACAGGCAAGACAATTACACTCGAGGTCGAGCCCTCA 26856 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || || | ||| |||||| ||||| |||||||||||||| |||||| Sbjct 26855 GATACCATTGAAAACGTCAAGGCTAAAATCCAGGACAAGGAAGGGATTCCACCAGACCAA 26796 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || || || || || ||| | ||||||| || ||| | || || || Sbjct 26795 CAACGTCTCATCTTCGCAGGAAAGCAACTTGAAGATGGACGAACTCTTTCAGACTATAAC 26736 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||| || || || || ||||| || Sbjct 26735 ATCCAGAAAGAGTCTACTCTTCACTTAGTACT 26704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433317680564510