Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1005 230 3e-55 >seq1005 Length=21531 Score = 230 bits (254), Expect = 3e-55 Identities = 525/782 (67%), Gaps = 31/782 (4%) Strand=Plus/Plus Query 92923 TCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACG 92982 |||||| || |||||||| ||||| ||| |||| | | |||||||| | ||| Sbjct 9155 TCTATCGGCAACAAATTCAATGTATTGACACATGAGCACTTGGTTCATTCCAATAAGCGA 9214 Query 92983 TACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTT--------- 93033 || || | || || || || || |||| || || |||||||||| | Sbjct 9215 GACTGGCAATGCATCTGTTAAAAACTCTTGTTCAATGCTAACGGCTTCTGTGACAATGCT 9274 Query 93034 CAAGATTTCTATTACTCTACTATTTGGTGGTTTTTGTACG-ACATAATTGTACATTAAGC 93092 |||||||| | | |||| | ||| | |||| | | || ||| ||| | | Sbjct 9275 CAAGATTTTT--TCCTCTGAT----GGTTTTCTTTGCAGGTACCTAA----ACAACAGAC 9324 Query 93093 ACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAAC 93152 | |||| || || || | || ||||| | | || | || || |||||| | | Sbjct 9325 ATCCAAAATCTGTGTGAAGGCCCTCGTCCCTACAGATAAGTTCGTTTGAGAATGTAAGGC 9384 Query 93153 CTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTA 93212 |||| | || |||| |||||| | ||| || || | |||||| || |||||||| | Sbjct 9385 CTGGCATGAGCCCTCTTTTCTTCAACCAGAAGATGGCAGCAAAGGAGCCTGAAAAAAAGA 9444 Query 93213 TACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-CTGCTG 93271 ||| || | | || ||||| ||| ||| || |||| | || ||| || || Sbjct 9445 CACCCTCGATTACAGCGAATGCAGCAAGACGCTCTCCAAAGCTGGCCTCCTTATCTTCT- 9503 Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331 ||||||||||| ||||| | |||||| | ||||| || | |||| | ||||| Sbjct 9504 ATCCATTTTAATGCCCATTGGGCTTTGCGTCTGATACAGGGAATGTTTTCAACTGCGTTG 9563 Query 93332 AATAGGTAATCTCGCTCGTCCGAATC-TCGT--ATGTATGTATCGATTAACAGAGAATAC 93388 || ||||| | || || | || || | |||||||| || || || || || ||| Sbjct 9564 AAAAGGTAG---CTCTTTTCTGCTTCATCCTTAATGTATGTGTCTATCAAGAGTGAGTAC 9620 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 |||||| |||| ||||||||| |||||||||||||||||| | | ||||| | Sbjct 9621 ATTTCACTGTGGATATTCTCCATCATAATTTGGAATCCGTAGAAGCTACGTGCTTCTGGT 9680 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 ||||| || |||| | ||| | || ||||||||||| ||||| || || || ||| Sbjct 9681 ATCTGAACCTCTTTACCAAAGTTAAAAACAAGATTTTCATTCACTATTCCGTCTGAGGCT 9740 Query 93509 GCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAG---CTTATCC 93565 |||||||| |||| || || || ||||||| | | |||| || || || || ||| Sbjct 9741 GCAAAAAAGGCCAGAATGTGTTTGATAAAATATCTTTCATTGTCATTGAGTTTGTTTTCC 9800 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || | | ||| | | ||||| || |||||| ||||||| ||||||||||| || Sbjct 9801 CAGTGCTCAATATCATGCGCTAGATCAACCTCTTCGGCAGTCCAGAACGATGCTTCGGCC 9860 Query 93626 TTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGG 93685 ||||||||||| | ||| || || |||| |||||||| || ||||| | || ||| Sbjct 9861 TTTTTGTACATGTTCCAAATCTCAGTGTATTTGATTGGAAACATCACAAATCTGTTGGGG 9920 Query 93686 TT 93687 || Sbjct 9921 TT 9922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556847198674960