Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq845 159 6e-34 seq462 159 6e-34 seq492 158 2e-33 seq182 134 3e-26 >seq845 Length=10035 Score = 159 bits (176), Expect = 6e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | |||||||| | || ||||| |||||||||||||| || || Sbjct 5435 CCACCACGAAGGCGGAGCACCAAGTGCAAAGTAGACTCCTTTTGGATGTTATAGTCTGAC 5376 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| | ||||| || | ||||| || ||||| || | || |||||| || |||||| Sbjct 5375 AATGTACGACCATCCTCGAGTTGCTTTCCTGCGAAAATCAATCGTTGTTGATCTGGTGGA 5316 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || |||||||||||||| || || || |||| | || || Sbjct 5315 ATTCCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATAGTATCTGAGGGCTCAACC 5256 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | ||| || || || || || || ||||| ||||| ||||||||| Sbjct 5255 TCGAGGGTAATTGTCTTACCGGTAAGTGTCTTTACGAAGATCTGCATT 5208 >seq462 Length=10693 Score = 159 bits (176), Expect = 6e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | |||||||| | || ||||| |||||||||||||| || || Sbjct 5463 CCACCACGAAGGCGGAGCACCAAGTGCAAAGTAGACTCCTTTTGGATGTTATAGTCTGAC 5404 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| | ||||| || | ||||| || ||||| || | || |||||| || |||||| Sbjct 5403 AATGTACGACCATCCTCGAGTTGCTTTCCTGCGAAAATCAATCGTTGTTGATCTGGTGGA 5344 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || |||||||||||||| || || || |||| | || || Sbjct 5343 ATTCCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATAGTATCTGAGGGCTCAACC 5284 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | ||| || || || || || || ||||| ||||| ||||||||| Sbjct 5283 TCGAGGGTAATTGTCTTACCGGTAAGTGTCTTTACGAAGATCTGCATT 5236 >seq492 Length=46864 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||||||| || || |||||||| ||||||||||| || || Sbjct 26917 CCACCACGCAGACGAAGTACCAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGAA 26976 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||||| || ||||| ||||| | ||||||||| |||||| Sbjct 26977 AGGGTTCGTCCATCTTCAAGTTGCTTTCCTGCGAAGATGAGACGTTGTTGGTCTGGTGGA 27036 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| || |||||||| || |||||| || ||||| |||| | || || Sbjct 27037 ATTCCTTCCTTATCCTGAATCTTGGCTTTGACGTTTTCAATGGTATCTGAGGGCTCGACC 27096 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || || || || || | || || ||||| |||||||| Sbjct 27097 TCGAGTGTAATTGTCTTGCCTGTCAAAGTTTTTACGAAAATCTGCAT 27143 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||| ||||| || || |||||||| ||||||||||| || || Sbjct 26689 CCACCACGCAGACGAAGTACTAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGAA 26748 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||||| || ||||| ||||| | ||||||||| |||||| Sbjct 26749 AGAGTTCGTCCATCTTCAAGTTGCTTTCCTGCGAAGATGAGACGTTGTTGGTCTGGTGGA 26808 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || || || ||||||||| || ||||| |||| | || || Sbjct 26809 ATCCCTTCCTTGTCCTGGATTTTAGCCTTGACGTTTTCAATGGTATCTGAGGGCTCGACC 26868 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || || || || || | || || ||||| |||||||| Sbjct 26869 TCGAGTGTAATTGTCTTGCCTGTCAAAGTTTTTACGAAAATCTGCAT 26915 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||||||| || || |||||||| ||||||||||| || || Sbjct 27145 CCACCACGCAGACGAAGTACCAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGAA 27204 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||||| || ||||| || || | ||||||||| |||||| Sbjct 27205 AGGGTTCGTCCATCTTCAAGTTGCTTTCCTGCGAAGATAAGACGTTGTTGGTCTGGTGGA 27264 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| || |||||||| || |||||| || ||||| |||| | || || Sbjct 27265 ATTCCTTCCTTATCCTGAATCTTGGCTTTGACGTTTTCAATGGTATCTGAGGGCTCGACC 27324 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || || || || || | ||| || || || |||||||| Sbjct 27325 TCGAGTGTAATTGTCTTGCCTGTCAAGGTTTTTACAAAAATCTGCAT 27371 >seq182 Length=36121 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| | || ||||| || ||||||||||| ||||| Sbjct 35317 CCACCACGCAGACGGAGAACCAAGTGCAATGTAGACTCCTTCTGGATGTTATAGTCGGAC 35258 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || |||||||| || || || || || || | || |||||| || |||||| Sbjct 35257 AAAGTGCGTCCGTCTTCTAATTGTTTTCCTGCAAAAATCAATCGTTGTTGATCTGGTGGA 35198 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||||| || |||||||| || | | || || Sbjct 35197 ATTCCCTCCTTGTCCTGGATCTTAGCCTTAACATTTTCGATGGTATCGGAAGGCTCGACC 35138 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || || | ||||| || || |||||||| Sbjct 35137 TCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACAAAAATCTGCAT 35091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921599889372880