Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq492 127 2e-24 seq182 87.8 2e-12 >seq492 Length=46864 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | ||||| ||||| || ||||| || || Sbjct 26914 ATACCACCACGCAGACGAAGTACCAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCT 26973 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||||||||| || || ||| |||||||||| |||||||| || Sbjct 26974 GAAAGGGTTCGTCCATCTTCAAGTTGCTTTCCTGCGAAGATGAGACGTTGTTGGTCTGGT 27033 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| || || |||||| ||| | | ||||| ||| || | || ||| Sbjct 27034 GGAATTCCTTCCTTATCCTGAATCTTGGCTTTGACGTTTTCAATGGTATCTGAGGGCTCG 27093 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| |||| ||||||||| ||||||||||| Sbjct 27094 ACCTCGAGTGTAATTGTCTTGCCTGTCAAAGTTTTTACGAAAATCTGCAT 27143 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | ||||| || | ||||| ||||| || ||||| || || Sbjct 26688 ACCACCACGCAGACGAAGTACTAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGA 26747 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||| || |||||||||||| || || ||| |||||||||| |||||||| || || Sbjct 26748 AAGAGTTCGTCCATCTTCAAGTTGCTTTCCTGCGAAGATGAGACGTTGTTGGTCTGGTGG 26807 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| ||||| || || || | | ||||| ||| || | || ||||| Sbjct 26808 AATCCCTTCCTTGTCCTGGATTTTAGCCTTGACGTTTTCAATGGTATCTGAGGGCTCGAC 26867 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || ||||| |||| ||||||||| ||||||||||| Sbjct 26868 CTCGAGTGTAATTGTCTTGCCTGTCAAAGTTTTTACGAAAATCTGCAT 26915 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | ||||| ||||| || ||||| || || Sbjct 27142 ATACCACCACGCAGACGAAGTACCAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCT 27201 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||||||||| || || ||| |||| ||||| |||||||| || Sbjct 27202 GAAAGGGTTCGTCCATCTTCAAGTTGCTTTCCTGCGAAGATAAGACGTTGTTGGTCTGGT 27261 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| || || |||||| ||| | | ||||| ||| || | || ||| Sbjct 27262 GGAATTCCTTCCTTATCCTGAATCTTGGCTTTGACGTTTTCAATGGTATCTGAGGGCTCG 27321 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| |||| |||||||||||||||||||| Sbjct 27322 ACCTCGAGTGTAATTGTCTTGCCTGTCAAGGTTTTTACAAAAATCTGCAT 27371 >seq182 Length=36121 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | ||| || || | ||||| || || || ||||| || ||| Sbjct 35318 ACCACCACGCAGACGGAGAACCAAGTGCAATGTAGACTCCTTCTGGATGTTATAGTCGGA 35259 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||| || ||||| | |||||| || || | || | || ||||| || || || Sbjct 35258 CAAAGTGCGTCCGTCTTCTAATTGTTTTCCTGCAAAAATCAATCGTTGTTGATCTGGTGG 35199 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| || || ||||| ||||| || | | ||| | ||| |||| | ||||| Sbjct 35198 AATTCCCTCCTTGTCCTGGATCTTAGCCTTAACATTTTCGATGGTATCGGAAGGCTCGAC 35139 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | || || ||||||| ||| || |||||||||||||| Sbjct 35138 CTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACAAAAATCTGCAT 35091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420124394761848