Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1005 131 3e-25 >seq1005 Length=21531 Score = 131 bits (144), Expect = 3e-25 Identities = 552/857 (64%), Gaps = 16/857 (2%) Strand=Plus/Minus Query 42297 GACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGAC 42356 || || ||| ||||||||| ||||| | || |||||| ||||| ||| |||| Sbjct 9883 GAGATTTGGAACATGTACAAAAAGGCCGAAGCATCGTTCTGGACTGCCGAAGAGGTTGAT 9824 Query 42357 CTGGCCAAGGACACGGCCGGCTGGGAGTC---ACTGTCTGAGAACGAAAAGTTTTTCCTC 42413 || || | || | | |||||| ||| ||| || |||| | ||| || Sbjct 9823 CTAGCGCATGATATTGAGCACTGGGAAAACAAACTCAATGACAATGAAAGATATTTTATC 9764 Query 42414 AAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACC 42473 ||| |||| |||||||| || || ||||| ||||| ||||| ||||| || || | Sbjct 9763 AAACACATTCTGGCCTTTTTTGCAGCCTCAGACGGAATAGTGAATGAAAATCTTGTTTTT 9704 Query 42474 AGGTTCATGAAAGAGGTGCAG-TACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGC 42532 | || |||||||| ||| ||| || || || |||||||||| ||||| || Sbjct 9703 AACTTTGGTAAAGAGGTTCAGATACCA-GAAGCACGTAGCTTCTACGGATTCCAAATTAT 9645 Query 42533 CATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC 42592 || ||||| | ||| ||| ||||| | || | |||| ||||| |||| Sbjct 9644 GATGGAGAATATCCACAGTGAAATGTACTCACTCTTGATAGACACATACATTAAGGATGA 9585 Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAG-AAGG 42651 | || | | || ||||| || | || | || ||||| |||| || | || | Sbjct 9584 AGCAGAAAAGAGCTACCTTTTCAACGCAGTTGAAAACATTCCCTGTATCA-GACGCAAAG 9526 Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAG 42711 | | ||||| | || ||||| || | || || | || || ||| | || | | Sbjct 9525 CCCAATGGGCATTAAAATGGATAGAAGATAAGGAGGCCAGCTTTGGAGAGCGTCTTGCTG 9466 Query 42712 CCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA 42771 | || | | ||||||| |||| || || ||| |||| || ||||||||||| | | Sbjct 9465 CATTCGCTGTAATCGAGGGTGTCTTTTTTTCAGGCTCCTTTGCTGCCATCTTCTGGTTGA 9406 Query 42772 AGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830 || | | ||| || ||||| || || || ||||| |||||||| ||| | ||||||||| Sbjct 9405 AGAAAAGAGGGCTC-ATGCCAGGCCTTACATTCTCAAACGAACTTATCTGTAGGGACGAG 9347 Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCT-CAGGCACAAGCCCTC 42889 || || || | || |||| || ||||| | || |||| || | || || || Sbjct 9346 GGCCTTCACACAGATTTTGGATG---TCTGTTGTTTAGGTACCTGCAAAGA-AAACCATC 9291 Query 42890 GAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949 |||| || | ||| |||| || ||||| || || | ||||| | || Sbjct 9290 AGAGGAAAAAATCTTGAGCATTGTCACAGAAGCCGTTAGCATTGAACAAGAGTTTTTAAC 9231 Query 42950 GCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCA 43009 | | |||| || || || | || |||||||| | |||||||| | ||||| | Sbjct 9230 AGATGCATTGCCAGTCTCGCTTATTGGAATGAACCAAGTGCTCATGTGTCAATACATTGA 9171 Query 43010 GTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGT 43068 | || ||||| || || || | ||||| | | | | ||||||||| | Sbjct 9170 ATTTGTTGCCGATAGACTGCTAGTTGAACTTGGGT-TGAACAAACACTACAACACAACCA 9112 Query 43069 GCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGC 43128 ||| ||| ||||||||| | || || || ||||||| |||||||| || |||||| Sbjct 9111 ACCCATTCAGCTTTATGGATATGATTTCAATGCAGGGCAAAACCAACTTCTTTGAGAAGA 9052 Query 43129 GCGTCGCCGACTACCAG 43145 || | || |||||| Sbjct 9051 AGGTTTCAGATTACCAG 9035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944316134515040