Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq492 114 1e-20 seq1894 98.7 1e-15 seq732 98.7 1e-15 >seq492 Length=46864 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| |||| |||| || || ||||| || ||||| || |||| Sbjct 26688 ACCACCACGCAGACGAAGTACTAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGA 26747 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | |||||||| ||||| || || | ||||| || || ||||| || || Sbjct 26748 AAGAGTTCGTCCATCTTCAAGTTGCTTTCCTGCGAAGATGAGACGTTGTTGGTCTGGTGG 26807 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || ||||| ||| || || | ||||| || || || Sbjct 26808 AATCCCTTCCTTGTCCTGGATTTTAGCCTTGACGTTTTCAATGGTATCTGAGGGCTCGAC 26867 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| |||||||||||||||||||| ||||| Sbjct 26868 CTCGAGTGTAATTGTCTTGCCTGTCAAAGTTTTTACGAAAATCTGCAT 26915 Score = 113 bits (124), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || | |||| || || ||||| || ||||| || |||| Sbjct 26916 ACCACCACGCAGACGAAGTACCAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGA 26975 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | |||||||| ||||| || || | ||||| || || ||||| || || Sbjct 26976 AAGGGTTCGTCCATCTTCAAGTTGCTTTCCTGCGAAGATGAGACGTTGTTGGTCTGGTGG 27035 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||||||||| || || || | | || ||||| || || | ||||| || || | Sbjct 27036 AATTCCTTCCTTATCCTG-AATCTTGGCTTTGACGTTTTCAATGGTATCTGAGGGCTCGA 27094 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | || | |||||||| |||||||||||||||||||| ||||| Sbjct 27095 CCTCGAGTGTAATTGTCTTGCCTGTCAAAGTTTTTACGAAAATCTGCAT 27143 Score = 100 bits (110), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || | |||| || || ||||| || ||||| || |||| Sbjct 27144 ACCACCACGCAGACGAAGTACCAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGA 27203 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | |||||||| ||||| || || | || || || || ||||| || || Sbjct 27204 AAGGGTTCGTCCATCTTCAAGTTGCTTTCCTGCGAAGATAAGACGTTGTTGGTCTGGTGG 27263 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||||||||| || || || | | || ||||| || || | ||||| || || | Sbjct 27264 AATTCCTTCCTTATCCTG-AATCTTGGCTTTGACGTTTTCAATGGTATCTGAGGGCTCGA 27322 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 | || | || | |||||||| ||||| |||||||| ||||| ||||| || Sbjct 27323 CCTCGAGTGTAATTGTCTTGCCTGTCAAGGTTTTTACAAAAATCTGCATATT 27374 >seq1894 Length=33155 Score = 98.7 bits (108), Expect = 1e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 154587 GACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCAC 154646 || ||||| || || || || | ||| |||| | |||||| ||| || || | ||| Sbjct 22249 GATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACTATCTCCGTACAC 22308 Query 154647 AAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCT 154706 || || |||| || ||||||||||| | ||| || || ||| ||||||| || ||| Sbjct 22309 AAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTGTTGCACGCATCT 22368 Query 154707 TTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTG 154755 |||||||| ||||| || ||||| ||||| | ||| | || | ||||| Sbjct 22369 TTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATTG 22417 >seq732 Length=14862 Score = 98.7 bits (108), Expect = 1e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 154587 GACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCAC 154646 || ||||| || || || || | ||| |||| | |||||| ||| || || | ||| Sbjct 8966 GATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACTATCTCCGTACAC 9025 Query 154647 AAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCT 154706 || || |||| || ||||||||||| | ||| || || ||| ||||||| || ||| Sbjct 9026 AAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTGTTGCACGCATCT 9085 Query 154707 TTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTG 154755 |||||||| ||||| || ||||| ||||| | ||| | || | ||||| Sbjct 9086 TTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATTG 9134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499632596175760