Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq492 95.1 1e-14 seq182 89.7 5e-13 >seq492 Length=46864 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 138383 CGCAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGT 138442 |||| || || |||| ||| | ||||| || | | ||||| || || ||||| |||| Sbjct 26685 CGCA-CCACCACGCAGACGAAGTACTAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGT 26743 Query 138443 CGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCG 138502 | | ||| || || || ||||| || || | |||| ||||| |||||||| | Sbjct 26744 CTGAAAGAGTTCGTCCATCTTCAAGTTGCTTTCCTGCGAAGATGAGACGTTGTTGGTCTG 26803 Query 138503 GAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACT 138562 | || || ||||| ||||| |||||| || | | ||| | ||| || | | || Sbjct 26804 GTGGAATCCCTTCCTTGTCCTGGATTTTAGCCTTGACGTTTTCAATGGTATCTGAGGGCT 26863 Query 138563 CCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | ||||||| || | || || || |||| ||||||||| ||||||||||| Sbjct 26864 CGACCTCGAGTGTAATTGTCTTGCCTGTCAAAGTTTTTACGAAAATCTGCAT 26915 >seq182 Length=36121 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | ||| || || | | |||||||| || ||||| |||||| | Sbjct 35317 CCACCACGCAGACGGAGAACCAAGTGCAATGTAGACTCCTTCTGGATGTTATAGTCGGAC 35258 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||| || | |||||| || | | | || | || ||||| || || || Sbjct 35257 AAAGTGCGTCCGTCTTCTAATTGTTTTCCTGCAAAAATCAATCGTTGTTGATCTGGTGGA 35198 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | ||| | ||| |||| | ||| ||| Sbjct 35197 ATTCCCTCCTTGTCCTGGATCTTAGCCTTAACATTTTCGATGGTATCGGAAGGCTCGACC 35138 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| |||| ||| || |||||||||||||| Sbjct 35137 TCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACAAAAATCTGCAT 35091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496250278790880