Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1894 161 1e-34 seq732 161 1e-34 seq1005 114 2e-20 >seq1894 Length=33155 Score = 161 bits (178), Expect = 1e-34 Identities = 545/838 (65%), Gaps = 22/838 (3%) Strand=Plus/Plus Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 ||||| || ||||| |||| ||||||||||| || || ||||||| || | Sbjct 22237 GGAAGTGCTATTGATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACT 22296 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || ||||||||||| || ||||| || ||||||| ||||| || |||||||| || Sbjct 22297 ATCTCCGTACACAAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTG 22356 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || |||||||| ||||| | ||| |||||||| || || || |||| || | | ||| Sbjct 22357 TTGCACGCATCTTTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATT 22416 Query 116605 GCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCC-------TCCTC 116657 || | ||| | | ||||| || | | || || || ||| | || Sbjct 22417 GCATACCACAGTTGTTGAGCTGGTAC--TCTCTTT--CTGGCGAGTCCTGGTGTATTTTC 22472 Query 116658 GTACTTTGTGTAGAGGGCCTCAAACTCTTC-ACCCACAGCCTCTGAGAGCCCTGGTGCCT 116716 || |||||||| || ||||||||| || |||||| |||||||||| ||| |||| Sbjct 22473 ATATTTTGTGTACAGCTTCTCAAACTCATCTCCCCACA-CCTCTGAGAGATTTGGCGCCT 22531 Query 116717 TATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTG 116776 || ||| || || |||||||||| || ||| ||| ||||||||||| || || | Sbjct 22532 CATGTGGGCAAAATAGAGACCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGG 22591 Query 116777 GGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGAC 116836 | ||||| | | |||| | ||| || ||| ||||| | || ||||| Sbjct 22592 GAATCCACATTCCATAGAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATTCTTCT 22651 Query 116837 GCA-ACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGAC 116895 || ||| | || || | | ||| |||||||| || |||| || | || | || | Sbjct 22652 TCAGACT-AAGGAAATCAAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATG-C 22709 Query 116896 CCCTTGCGAC----GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAG 116951 ||| | | ||| |||||| ||||| || || || ||| ||||| || || Sbjct 22710 ACCTGGTCTCTTGTTTCCACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAG 22769 Query 116952 CATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGA-CTTGTTGGCTC 117010 |||||| | | |||| |||| |||||||| || ||| ||| | || |||||| Sbjct 22770 CATTGGTACTACTCCATTAGATGTTCCATTTGTTCCTGCAATGTAAGATCCTG-TGGCTC 22828 Query 117011 TGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCG 117070 ||| | ||| | || ||||| || ||||| | ||||| || || |||| | Sbjct 22829 TGATGTTGTGTACACTCAATCCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCT 22888 Query 117071 TGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCG 117130 | || | | ||||| || || || ||| | | |||| | | ||||| | Sbjct 22889 TTAGTGTATCATAGATACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATG 22948 Query 117131 ACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC 117190 | | |||||||| ||| || | ||| || || ||||||| || || | || | | Sbjct 22949 AGAGTTGTGGCCGGTTTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAATAGCC 23008 Query 117191 CTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACC 117248 || |||||| | | || || || | | | ||||||||| ||||| || || Sbjct 23009 GCTGCGACATCATGTTATATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCC 23066 >seq732 Length=14862 Score = 161 bits (178), Expect = 1e-34 Identities = 545/838 (65%), Gaps = 22/838 (3%) Strand=Plus/Plus Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 ||||| || ||||| |||| ||||||||||| || || ||||||| || | Sbjct 8954 GGAAGTGCTATTGATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACT 9013 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || ||||||||||| || ||||| || ||||||| ||||| || |||||||| || Sbjct 9014 ATCTCCGTACACAAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTG 9073 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || |||||||| ||||| | ||| |||||||| || || || |||| || | | ||| Sbjct 9074 TTGCACGCATCTTTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATT 9133 Query 116605 GCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCC-------TCCTC 116657 || | ||| | | ||||| || | | || || || ||| | || Sbjct 9134 GCATACCACAGTTGTTGAGCTGGTAC--TCTCTTT--CTGGCGAGTCCTGGTGTATTTTC 9189 Query 116658 GTACTTTGTGTAGAGGGCCTCAAACTCTTC-ACCCACAGCCTCTGAGAGCCCTGGTGCCT 116716 || |||||||| || ||||||||| || |||||| |||||||||| ||| |||| Sbjct 9190 ATATTTTGTGTACAGCTTCTCAAACTCATCTCCCCACA-CCTCTGAGAGATTTGGCGCCT 9248 Query 116717 TATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTG 116776 || ||| || || |||||||||| || ||| ||| ||||||||||| || || | Sbjct 9249 CATGTGGGCAAAATAGAGACCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGG 9308 Query 116777 GGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGAC 116836 | ||||| | | |||| | ||| || ||| ||||| | || ||||| Sbjct 9309 GAATCCACATTCCATAGAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATTCTTCT 9368 Query 116837 GCA-ACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGAC 116895 || ||| | || || | | ||| |||||||| || |||| || | || | || | Sbjct 9369 TCAGACT-AAGGAAATCAAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATG-C 9426 Query 116896 CCCTTGCGAC----GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAG 116951 ||| | | ||| |||||| ||||| || || || ||| ||||| || || Sbjct 9427 ACCTGGTCTCTTGTTTCCACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAG 9486 Query 116952 CATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGA-CTTGTTGGCTC 117010 |||||| | | |||| |||| |||||||| || ||| ||| | || |||||| Sbjct 9487 CATTGGTACTACTCCATTAGATGTTCCATTTGTTCCTGCAATGTAAGATCCTG-TGGCTC 9545 Query 117011 TGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCG 117070 ||| | ||| | || ||||| || ||||| | ||||| || || |||| | Sbjct 9546 TGATGTTGTGTACACTCAATCCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCT 9605 Query 117071 TGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCG 117130 | || | | ||||| || || || ||| | | |||| | | ||||| | Sbjct 9606 TTAGTGTATCATAGATACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATG 9665 Query 117131 ACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC 117190 | | |||||||| ||| || | ||| || || ||||||| || || | || | | Sbjct 9666 AGAGTTGTGGCCGGTTTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAATAGCC 9725 Query 117191 CTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACC 117248 || |||||| | | || || || | | | ||||||||| ||||| || || Sbjct 9726 GCTGCGACATCATGTTATATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCC 9783 >seq1005 Length=21531 Score = 114 bits (126), Expect = 2e-20 Identities = 350/528 (66%), Gaps = 25/528 (5%) Strand=Plus/Plus Query 127521 CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 127580 |||| ||| ||| || |||||||| | |||| ||||| || ||||| || |||| Sbjct 9328 CAAAATCTGTGTGAAGGCCCTCGTCCCTACAGATAAGTTCGTTTGAGAATGTAAGGCCTG 9387 Query 127581 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 127640 ||||||| || | |||||||||||||| || ||| ||| ||||| || || |||| | Sbjct 9388 GCATGAGCCCTCTTTTCTTCAACCAGAAGATGGCAGCAAAGGAGCCTGAAAAAAAGACAC 9447 Query 127641 CCTCCA-CACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGT-ATCA 127696 |||| | ||| ||||| ||| |||||||| ||| ||| || || || | || Sbjct 9448 CCTCGATTACA-GCGAATGCAGCAAGACGCTCTCCAA---AGCTGGCCTCCTTATCTTCT 9503 Query 127697 AACCACTTCATCGCCCACTGTGCCTT-TTTCTCGATACATGGGACGGTCTGGATCGCTTC 127755 | ||| || | ||||| || || || ||| |||||| || | | | | | || | Sbjct 9504 ATCCATTTTAATGCCCATTGGGCTTTGCGTCT-GATACAGGGAATGTTTTCAACTGCGTT 9562 Query 127756 AAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 127815 || || | ||||||||| | ||| || ||||| | ||||| | ||| || | Sbjct 9563 GAAAAGGTAGCTCTTTTCTGCTTCATCCTTAATGTATGTGTCTATCAAGAGTGAGTACAT 9622 Query 127816 TTCGCCGTGGACCATT-----TCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCG 127870 ||| | ||||| ||| |||| || || | ||||||| || ||||| Sbjct 9623 TTCACTGTGGA-TATTCTCCATCATAAT----TTGGAATCCGTAGAAGCTACGTGCTTCT 9677 Query 127871 CTTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGAC 127930 |||||| ||||| | |||| || | | ||| ||| || ||||| || || Sbjct 9678 GGTATCTGAACCTCTTTACCAAAGTTAAAAACAAGATTTTCATTCACTATTCCGTCTGAG 9737 Query 127931 CCAGCAAAAAACGCCAGGATATACTTTAT-GAATTTCTGTTCATTCTCGTTCAG---GGT 127986 | |||||||| ||||| || | || || ||| ||| |||||| || || || | | Sbjct 9738 GCTGCAAAAAAGGCCAGAATGTGTTTGATAAAATATCT-TTCATTGTCATTGAGTTTGTT 9796 Query 127987 CTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 | ||||| || | ||| | | ||||| ||||| || |||||||| Sbjct 9797 TTCCCAGTGCTCAATATCATGCGCTAGATCAACCTCTTCGGCAGTCCA 9844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613492215086640