Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq492 120 7e-22 seq845 96.9 8e-15 seq462 96.9 8e-15 >seq492 Length=46864 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| ||||| ||||| || |||| ||| ||||| | | || | ||||||| Sbjct 26932 AGTACCAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGAAAGGGTTCGTCCATCT 26991 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || |||||||| |||||||||||||| || ||||| || ||||||||| ||| Sbjct 26992 TCAAGTTGCTTTCCTGCGAAGATGAGACGTTGTTGGTCTGGTGGAATTCCTTCCTTATCC 27051 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| || ||| ||| | ||| |||| | || || || | || || ||| Sbjct 27052 TGAATCTTGGCTTTGACGTTTTCAATGGTATCTGAGGGCTCGACCTCGAGTGTAATTGTC 27111 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | |||||| || ||||| || Sbjct 27112 TTGCCTGTCAAAGTTTTTACGAAAATCTG 27140 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| ||||| ||||| || |||| ||| ||||| | | ||| | ||||||| Sbjct 26704 AGTACTAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGAAAGAGTTCGTCCATCT 26763 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || |||||||| |||||||||||||| || ||||| || ||| ||||| ||| Sbjct 26764 TCAAGTTGCTTTCCTGCGAAGATGAGACGTTGTTGGTCTGGTGGAATCCCTTCCTTGTCC 26823 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| ||| ||| | ||| |||| | || || || | || || ||| Sbjct 26824 TGGATTTTAGCCTTGACGTTTTCAATGGTATCTGAGGGCTCGACCTCGAGTGTAATTGTC 26883 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | |||||| || ||||| || Sbjct 26884 TTGCCTGTCAAAGTTTTTACGAAAATCTG 26912 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| ||||| ||||| || |||| ||| ||||| | | || | ||||||| Sbjct 27160 AGTACCAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGAAAGGGTTCGTCCATCT 27219 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || |||||||| |||||||| ||||| || ||||| || ||||||||| ||| Sbjct 27220 TCAAGTTGCTTTCCTGCGAAGATAAGACGTTGTTGGTCTGGTGGAATTCCTTCCTTATCC 27279 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| || ||| ||| | ||| |||| | || || || | || || ||| Sbjct 27280 TGAATCTTGGCTTTGACGTTTTCAATGGTATCTGAGGGCTCGACCTCGAGTGTAATTGTC 27339 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | ||||| |||||||| || Sbjct 27340 TTGCCTGTCAAGGTTTTTACAAAAATCTG 27368 >seq845 Length=10035 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| | ||| ||||||||||||| ||| ||||| | ||| || Sbjct 5429 CGAAGGCGGAGCACCAAGTGCAAAGTAGACTCCTTTTGGATGTTATAGTCTGACAATGTA 5370 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || || |||||||| ||||| || | || || || || || ||||||| Sbjct 5369 CGACCATCCTCGAGTTGCTTTCCTGCGAAAATCAATCGTTGTTGATCTGGTGGAATTCCT 5310 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| |||||| ||| || ||| | || |||| | || || || | Sbjct 5309 TCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATAGTATCTGAGGGCTCAACCTCGAGG 5250 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || || || || || || || || Sbjct 5249 GTAATTGTCTTACCGGTAAGTGTCTTTACGAAGATCTG 5212 >seq462 Length=10693 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| | ||| ||||||||||||| ||| ||||| | ||| || Sbjct 5457 CGAAGGCGGAGCACCAAGTGCAAAGTAGACTCCTTTTGGATGTTATAGTCTGACAATGTA 5398 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || || |||||||| ||||| || | || || || || || ||||||| Sbjct 5397 CGACCATCCTCGAGTTGCTTTCCTGCGAAAATCAATCGTTGTTGATCTGGTGGAATTCCT 5338 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| |||||| ||| || ||| | || |||| | || || || | Sbjct 5337 TCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATAGTATCTGAGGGCTCAACCTCGAGG 5278 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || || || || || || || || Sbjct 5277 GTAATTGTCTTACCGGTAAGTGTCTTTACGAAGATCTG 5240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178892084960918