Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1005 181 1e-40 seq492 102 8e-17 seq182 98.7 1e-15 seq845 93.3 4e-14 seq462 93.3 4e-14 >seq1005 Length=21531 Score = 181 bits (200), Expect = 1e-40 Identities = 577/885 (65%), Gaps = 21/885 (2%) Strand=Plus/Plus Query 132619 ACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAG 132678 ||||| |||||||| || || ||||| |||| || ||||| | |||||| || Sbjct 9048 ACCTTCTTCTCAAAGAAGTTGGTTTTGCCCTGCATTGAAATCATATCCATAAAGCTGAAT 9107 Query 132679 GGGTTGGCTGTGTTGTAGTGCTTGGTG--CCGATCAGGTCGACGAGCAGCCTGTCGGCCA 132736 ||||||| |||||||||||| ||| | || | || || || ||||| || ||||| | Sbjct 9108 GGGTTGGTTGTGTTGTAGTGTTTGTTCAACCCA--AGTTCAACTAGCAGTCTATCGGCAA 9165 Query 132737 CGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCG 132796 | || || |||||||| ||||| | || | ||| | || || |||| | Sbjct 9166 CAAATTCAATGTATTGACACATGAGCACTTGGTTCATTCCAATAAGCGAGACTGGCAATG 9225 Query 132797 CTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCG 132856 | || || | ||| ||| || ||| || || || ||||| || | | Sbjct 9226 CATCTGTTAAAAACTCTTGTTCAATGCTAACGGCTTCTGTGACAATGCTCAAGATTTTTT 9285 Query 132857 CCGCGCTCGGC---CGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCA 132913 || | || | ||||| | | | |||| || || |||| || || | Sbjct 9286 CCTCTGATGGTTTTCTTTGCAGGTA---CCTAAACAACAGACATCCAAAATCTGTGTGAA 9342 Query 132914 AGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTT 132973 |||||||||||| | || |||||||| ||| || | ||| |||||||| || | || Sbjct 9343 GGCCCTCGTCCCTACAGATAAGTTCGTTTGAGAATGTAAGGCCTGGCATGAGCCCTCTTT 9402 Query 132974 TTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGA 133033 | || | ||| || ||||| || || ||| ||||| ||||| ||||||| | |||| Sbjct 9403 TCTTCAACCAGAAGATGGCAGCAAAGGAGCCTGAAAAAAAGACACCCTCGATTACAGCGA 9462 Query 133034 AAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATT 133093 | || | || ||||| || || |||| || || | ||||| | ||||||| Sbjct 9463 ATGCAGCAAGACGCTCTCCAAAGCTGGCCTCCTTATCTTCTATCCATTTTAATGCCCATT 9522 Query 133094 CGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTT 133153 ||| || | ||| || || || |||| | ||||| || || | || | || || Sbjct 9523 GGGCTTTGCGTCTGATACAGGGAATGTTTTCAACTGCGTTGAA--AAGGTAGCT-CTTTT 9579 Query 133154 CCGAGGAACGC---ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCT 133210 | | | | | ||| ||||| || | | || |||||||| ||| | |||| Sbjct 9580 CTGCTTCATCCTTAATGTATGTGTCTATCAAGAGTGAGTACATTTCACTGTGGATATTCT 9639 Query 133211 CCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGA 133270 |||| ||||| || ||||| |||| || || || | ||| || |||| | | | Sbjct 9640 CCATCATAATTTGGAATCCGTAGAAGCTACGTGCTTCTGGTATCTGAACCTCTTTACCAA 9699 Query 133271 AACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGT 133330 | || |||||||| || || || ||||| ||| || ||||||||||| | || Sbjct 9700 AGTTAAAAACAAGATTTTCATTCACTATTCCGTCTGAGGCTGCAAAAAAGGCCAGAATGT 9759 Query 133331 GCTTGATGAAATGGCGCTCGTTGTCGTTCAA---GCGCTCCCAGTCGCGCG-TGTCCTTG 133386 | ||||| |||| | || ||||| || | | ||||||| || | | || | Sbjct 9760 GTTTGATAAAATATCTTTCATTGTCATTGAGTTTGTTTTCCCAGT-GCTCAATATCATGC 9818 Query 133387 GACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCAC 133446 | || || ||||| ||| | ||||| ||||| || ||||| ||||||||||| |||| Sbjct 9819 GCTAGATCAACCTCTTCGGCAGTCCAGAACGATGCTTCGGCCTTTTTGTACATGTTCCAA 9878 Query 133447 ATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTT 133491 || || | |||| || ||||| |||||||| | | ||||||| Sbjct 9879 ATCTCAGTGTATTTGATTGGAAACATCACAAATCTGTTGGGGTTT 9923 >seq492 Length=46864 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||||||||| | || ||||| || || || |||| |||||| || | Sbjct 27143 ATGCAGATTTTCGTAAAAACTTTGACAGGCAAGACAATTACACTCGAGGTCGAGCCCTCA 27084 Query 38304 GACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | || ||||| | |||| || || | || || || |||||||| | ||||| Sbjct 27083 GATACCATTGAAAACG-TCAAAGCCAAGATTCAGGATAAGGAAGGAATTCCACCAGACCA 27025 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || ||||| | ||| || || || || || || | || ||||| ||||| || Sbjct 27024 ACAACGTCTCATCTTCGCAGGAAAGCAACTTGAAGATGGACGAACCCTTTCAGACTATAA 26965 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| || || | || || || ||||| || ||| || | || || Sbjct 26964 CATCCAGAAAGAGTCTACTCTTCACTTGGTACTTCGTCTGCGTGGTGG 26917 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||||||||| | || ||||| || || || |||| |||||| || | Sbjct 26915 ATGCAGATTTTCGTAAAAACTTTGACAGGCAAGACAATTACACTCGAGGTCGAGCCCTCA 26856 Query 38304 GACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | || ||||| | || | ||||||| ||||| || || ||||| | ||||| Sbjct 26855 GATACCATTGAAAACG-TCAAGGCTAAAATCCAGGACAAGGAAGGGATTCCACCAGACCA 26797 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || ||||| | ||| || || || || || || | || || || ||||| || Sbjct 26796 ACAACGTCTCATCTTCGCAGGAAAGCAACTTGAAGATGGACGAACTCTTTCAGACTATAA 26737 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| || || | || || || || || || ||| || | || || Sbjct 26736 CATCCAGAAAGAGTCTACTCTTCACTTAGTACTTCGTCTGCGTGGTGG 26689 >seq182 Length=36121 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || || || ||||||||| | || |||||| | || Sbjct 35091 ATGCAGATTTTTGTTAAGACTTTGACCGGTAAGACCATCACCCTTGAGGTCGAGCCTTCC 35150 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | ||| |||| | || |||| ||||| ||||||||||| | || ||| Sbjct 35151 GATACCATCGAAAATGTTAAGGCTAAGATCCAGGACAAGGAGGGAATTCCACCAGATCAA 35210 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | |||| || || ||||| | || |||| ||||| | |||||| ||| Sbjct 35211 CAACGATTGATTTTTGCAGGAAAACAATTAGAAGACGGACGCACTTTGTCCGACTATAAC 35270 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || |||| ||||| || ||| || | || || Sbjct 35271 ATCCAGAAGGAGTCTACATTGCACTTGGTTCTCCGTCTGCGTGGTGG 35317 >seq845 Length=10035 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || |||||||| || || || || || || || ||| |||| || ||| || | Sbjct 5208 AATGCAGATCTTCGTAAAGACACTTACCGGTAAGACAATTACCCTCGAGGTTGAGCCCTC 5267 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | ||| | || | ||| |||| ||||| || |||||||| | || || Sbjct 5268 AGATACTATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGAATTCCACCAGATCA 5327 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | |||| ||| || || || || || || | || || | ||||| || Sbjct 5328 ACAACGATTGATTTTCGCAGGAAAGCAACTCGAGGATGGTCGTACATTGTCAGACTATAA 5387 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||||||| | || |||| |||||||| || Sbjct 5388 CATCCAAAAGGAGTCTACTTTGCACTTGGTGCTCCG 5423 >seq462 Length=10693 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || |||||||| || || || || || || || ||| |||| || ||| || | Sbjct 5236 AATGCAGATCTTCGTAAAGACACTTACCGGTAAGACAATTACCCTCGAGGTTGAGCCCTC 5295 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | ||| | || | ||| |||| ||||| || |||||||| | || || Sbjct 5296 AGATACTATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGAATTCCACCAGATCA 5355 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | |||| ||| || || || || || || | || || | ||||| || Sbjct 5356 ACAACGATTGATTTTCGCAGGAAAGCAACTCGAGGATGGTCGTACATTGTCAGACTATAA 5415 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||||||| | || |||| |||||||| || Sbjct 5416 CATCCAAAAGGAGTCTACTTTGCACTTGGTGCTCCG 5451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500160583279360