Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1894 158 1e-33 seq732 158 1e-33 seq1005 122 1e-22 seq182 84.2 3e-11 >seq1894 Length=33155 Score = 158 bits (174), Expect = 1e-33 Identities = 537/832 (65%), Gaps = 10/832 (1%) Strand=Plus/Plus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 ||||| || |||||||||||||| || |||||| || || | ||||| || | Sbjct 22237 GGAAGTGCTATTGATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACT 22296 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || |||||||||||| ||||| || || |||| |||| ||||| ||| || Sbjct 22297 ATCTCCGTACACAAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTG 22356 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||||||||| ||||| | |||||| ||||| || || || | ||||| | | |||| Sbjct 22357 TTGCACGCATCTTTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATT 22416 Query 106637 GCCTTCCACACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCG---CCTCGTAC 106693 || | ||||| | |||||||| | |||| |||| | || || Sbjct 22417 GCATACCACAGTTGTTGAGCTGGTACTCTCTTTCTGGCGAGTCCTGGTGTATTTTCATAT 22476 Query 106694 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753 |||||||| || |||||||| || ||| | | || |||||| ||| |||| | | Sbjct 22477 TTTGTGTACAGCTTCTCAAACTCATCTCCCCACACCTCTGAGAGATTTGGCGCCTCATGT 22536 Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813 || || || |||||||||| || ||| ||| ||||||||||| || || |||||| Sbjct 22537 GGGCAAAATAGAGACCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGGGAATC 22596 Query 106814 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 106873 |||| | || | ||| | || |||||| | ||| || || || | | Sbjct 22597 CACATTCCATAGAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATT-CTTCTTCAG 22655 Query 106874 TC-AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 106929 | |||||| || | | ||| |||||||||||||| | ||| | || | | || Sbjct 22656 ACTAAGGAAATCAAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCACCTGG 22715 Query 106930 -CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 106988 || | | ||| | || | ||||| | || || ||| ||||| || ||||||| Sbjct 22716 TCTCTTG-TTTCCACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCATTG 22774 Query 106989 GAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACAT 107048 | | | |||| ||| |||||||| || ||| |||| ||||||| | | Sbjct 22775 GTACTACTCCATTAGATGTTCCATTTGTTCCTGCAATGTAAGATCCTGTGGCTCTGATGT 22834 Query 107049 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 107108 || | || ||||| || || || | ||||| || ||||||| | | || | Sbjct 22835 TGTGTACACTCAATCCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTTAGTG 22894 Query 107109 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 107168 | |||||||||| | || || || | | || | | ||||| || | | Sbjct 22895 TATCATAGATACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAGAGTT 22954 Query 107169 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGG 107228 | || | ||| || | || || || ||||||| ||| || | || | | || | Sbjct 22955 GTGGCCGGTTTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAATAGCCGCTGCG 23014 Query 107229 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 107280 ||||| ||| ||||| || | | | ||||||||||| ||||| || || Sbjct 23015 ACATCATGTTATATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCC 23066 >seq732 Length=14862 Score = 158 bits (174), Expect = 1e-33 Identities = 537/832 (65%), Gaps = 10/832 (1%) Strand=Plus/Plus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 ||||| || |||||||||||||| || |||||| || || | ||||| || | Sbjct 8954 GGAAGTGCTATTGATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACT 9013 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || |||||||||||| ||||| || || |||| |||| ||||| ||| || Sbjct 9014 ATCTCCGTACACAAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTG 9073 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||||||||| ||||| | |||||| ||||| || || || | ||||| | | |||| Sbjct 9074 TTGCACGCATCTTTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATT 9133 Query 106637 GCCTTCCACACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCG---CCTCGTAC 106693 || | ||||| | |||||||| | |||| |||| | || || Sbjct 9134 GCATACCACAGTTGTTGAGCTGGTACTCTCTTTCTGGCGAGTCCTGGTGTATTTTCATAT 9193 Query 106694 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753 |||||||| || |||||||| || ||| | | || |||||| ||| |||| | | Sbjct 9194 TTTGTGTACAGCTTCTCAAACTCATCTCCCCACACCTCTGAGAGATTTGGCGCCTCATGT 9253 Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813 || || || |||||||||| || ||| ||| ||||||||||| || || |||||| Sbjct 9254 GGGCAAAATAGAGACCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGGGAATC 9313 Query 106814 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 106873 |||| | || | ||| | || |||||| | ||| || || || | | Sbjct 9314 CACATTCCATAGAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATT-CTTCTTCAG 9372 Query 106874 TC-AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 106929 | |||||| || | | ||| |||||||||||||| | ||| | || | | || Sbjct 9373 ACTAAGGAAATCAAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCACCTGG 9432 Query 106930 -CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 106988 || | | ||| | || | ||||| | || || ||| ||||| || ||||||| Sbjct 9433 TCTCTTG-TTTCCACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCATTG 9491 Query 106989 GAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACAT 107048 | | | |||| ||| |||||||| || ||| |||| ||||||| | | Sbjct 9492 GTACTACTCCATTAGATGTTCCATTTGTTCCTGCAATGTAAGATCCTGTGGCTCTGATGT 9551 Query 107049 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 107108 || | || ||||| || || || | ||||| || ||||||| | | || | Sbjct 9552 TGTGTACACTCAATCCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTTAGTG 9611 Query 107109 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 107168 | |||||||||| | || || || | | || | | ||||| || | | Sbjct 9612 TATCATAGATACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAGAGTT 9671 Query 107169 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGG 107228 | || | ||| || | || || || ||||||| ||| || | || | | || | Sbjct 9672 GTGGCCGGTTTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAATAGCCGCTGCG 9731 Query 107229 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 107280 ||||| ||| ||||| || | | | ||||||||||| ||||| || || Sbjct 9732 ACATCATGTTATATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCC 9783 >seq1005 Length=21531 Score = 122 bits (134), Expect = 1e-22 Identities = 342/515 (66%), Gaps = 19/515 (4%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| || ||||| || | | |||||||| |||||||| |||||||||||||| || Sbjct 9338 GTGAAGGCCCTCGTCCCTACAGATAAGTTCGTTTGAGAATGTAAGGCCTGGCATGAGCCC 9397 Query 117345 CCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCA-CA 117402 | ||||||||||| | || || ||| || || || || || |||| |||||| | | Sbjct 9398 TCTTTTCTTCAACCAGAAGATGGCAGCA-AAGGAGCCTGAAAAAAAGACACCCTCGATTA 9456 Query 117403 CACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATT 117462 || || || ||| ||| ||||| | ||| | ||| || | |||||| | | Sbjct 9457 CA-GCGAATGCAGCAAGACGCTCTCCAAAGCTGGCCTCCTTATCTTCTATCCATTTTAAT 9515 Query 117463 GCCCATTTCGCCTT-CTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTT 117521 ||||||| || || | ||| ||||| || | ||| | || | || | | | Sbjct 9516 GCCCATTGGGCTTTGCGTCT-GATACAGGGAATGTTTTCAACTGCGTTGAAAAGGTAGCT 9574 Query 117522 CTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAAC 117581 |||||| | | |||||||||||||| |||| ||||| ||| || |||| | || | Sbjct 9575 CTTTTCTGCTTCATCCTTAATGTATGTGTCTATCAAGAGTGAGTACATTTCACTGTGGA- 9633 Query 117582 CATT-----TCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACT 117636 ||| |||| || ||| || ||||||| || ||||| |||||| || Sbjct 9634 TATTCTCCATCATAAT----TTGGAATCCGTAGAAGCTACGTGCTTCTGGTATCTGAACC 9689 Query 117637 TCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAAT 117696 || | |||| || | | ||| ||| || ||||| || || | ||||| || Sbjct 9690 TCTTTACCAAAGTTAAAAACAAGATTTTCATTCACTATTCCGTCTGAGGCTGCAAAAAAG 9749 Query 117697 GCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCAG---GGTCTTCCAGTCGTCA 117753 ||||| |||| || || || | ||||||| ||||| || | | | ||||| ||| Sbjct 9750 GCCAGAATGTGTTTGATAAAATATCTTTCATTGTCATTGAGTTTGTTTTCCCAGTGCTCA 9809 Query 117754 AGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 | ||| | | | |||||| ||||| |||||||| Sbjct 9810 ATATCATGCGCTAGATCAACCTCTTCGGCAGTCCA 9844 >seq182 Length=36121 Score = 84.2 bits (92), Expect = 3e-11 Identities = 198/296 (67%), Gaps = 16/296 (5%) Strand=Plus/Minus Query 9191 ACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGC 9250 ||||||||| ||||| ||||| || ||| || |||| ||| ||||| || | Sbjct 7012 ACGATCAAAACGACCCGGACGGGTCAGAGCGCTGTCCAGGACATCTGGACGATTGGTACC 6953 Query 9251 GGCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTT 9310 || | || ||||| || || || || ||||||||| || ||||| || Sbjct 6952 AGCCAACACCACAATGTGTGCATCCGACGAGAACCCGTCCATCTCTACCAGCAGTTGATT 6893 Query 9311 AATAGTTTGTTC--CCGTTCATCATT-----CGCTG----GCATACCACCAGCACTGCGT 9359 |||| || || ||| |||||||| |||| | ||||||| | || | Sbjct 6892 --TAGTGTGCTCTCCCGCTCATCATTACCACCGCTAAACTGTTTACCACCGCCTCT---T 6838 Query 9360 TGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCG 9419 |||||| | |||||||| |||||||| |||| ||| |||||| |||| |||| Sbjct 6837 GACTTTCCAATTGCATCAATTTCATCAATAAAGATAATGCATGGTGAGTTTTTCTTGGCG 6778 Query 9420 ATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAA 9475 ||| ||| | ||| || || || || || ||||| ||||||||||||||||| Sbjct 6777 TTTTGAAACAAATCACGCACTCTGGAAGCTCCAACACCTACAAACATCTCCACAAA 6722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589966389718960