Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq669 212 5e-49 seq1037 145 6e-29 seq132 140 3e-27 seq492 102 7e-16 seq1068 98.7 8e-15 >seq669 Length=27575 Score = 212 bits (234), Expect = 5e-49 Identities = 388/559 (69%), Gaps = 17/559 (3%) Strand=Plus/Plus Query 549976 AATGTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGT 550035 |||| ||| ||||| || |||| |||||||| ||||| ||||| ||||| || || Sbjct 23987 AATGGCAACCAAAGCAG---TAGGAATAGATTTGGGAACAACATACTCATGTGTGGGAGT 24043 Query 550036 TTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATC 550095 |||||||| | | ||||||||| ||||||||||| ||||||||| | || || ||||| Sbjct 24044 ATGGCAAAACGACAGAGTTGAAATCATTGCCAATGACCAAGGTAACCGCACAACACCATC 24103 Query 550096 TTATGTTTCTTTCACGGAAACTGAAC-ATTTAGTTGGTGATGCAGCAAAATATCAAGC-- 550152 || || | ||||| || ||| | ||| |||| ||||||||||| | || | Sbjct 24104 ATACGTCGCCTTCACAGATGAAGAAAGACTTA-TTGGAGATGCAGCAAAGAACCAGGTAG 24162 Query 550153 CACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAA 550212 || || || || || || || | ||||| | || | || ||||||||| | ||| | Sbjct 24163 CAATG--AACCCAACAAACACAGTCTTTGACGTAAAGAGATTGATTGGAAGACGATTTGA 24220 Query 550213 TGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGG 550272 || | || || |||||||||| || | | | | | || || ||| || Sbjct 24221 GGACGCAGAAGTACAATCAGATATGAAACACTTTTCATACAAGATAGTAGATGAGAAAGG 24280 Query 550273 AAAACCTTA---TATTGAAGCTACTCATGAAGGATCTGTTAAACAATTTT-CACCAGAAC 550328 ||| || || ||| | || | || | ||| | || || ||| | |||||| Sbjct 24281 AAAGCCATACTGTATGGTAGA-ATACAAGGGGGA---GACCAAGAAGTTTACCCCAGAAG 24336 Query 550329 AAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAG 550388 |||| ||||||||| |||| | || |||| | | ||||| || | ||||| || Sbjct 24337 AAATATCATCTATGATTTTGAGTAAGATGAGAGAGACAGCTGAGGCATACATTGGTGCAG 24396 Query 550389 AAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTA 550448 | |||| |||||| || || || ||||||||||| || |||||||| ||| | ||||| | Sbjct 24397 AGGTTAAGGATGCTGTCATCACAGTACCAGCATACTTCAATGACTCTCAAAGACAAGCAA 24456 Query 550449 CTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTG 550508 | || ||||| ||| ||||| ||||| ||||| ||||||||||| || || || || | Sbjct 24457 CCAAGGATGCAGGAATGATTGCAGGACTGAATGTACTTCGTATTATTAACGAGCCAACAG 24516 Query 550509 CTGCTGCACTTGCATATGG 550527 | || || |||| || || Sbjct 24517 CAGCAGCCATTGCTTACGG 24535 >seq1037 Length=27417 Score = 145 bits (160), Expect = 6e-29 Identities = 392/596 (66%), Gaps = 8/596 (1%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| || || ||| | ||||| ||||| |||||||| ||| ||| || || | Sbjct 6928 AGCTATTGGAATTGATCTTGGAACAACATACTCTTGTGTTGCTGTATGGGAAGGTGAGAG 6869 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| ||||| |||||||| || ||||| ||| | || |||||||| |||||| | ||||| Sbjct 6868 AGTAGAAATCATTGCCAACGAGCAAGGAAACCGTACCACTCCATCATATGTTGCATTCAC 6809 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || | ||| || ||||| ||||| || || | || || | || || | || Sbjct 6808 AGACTCAGAAAGATTGGTTGGAGATGCCGCCAAGAACCAGTCCGCCATGAACCCAGCAAA 6749 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || | ||||| || || | || || |||||| | | | || | || |||| Sbjct 6748 CACCGTCTTTGACGCAAAGAGATTGATCGGAAGACGCTACGACGACCCACACGTCAAGGC 6689 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTT---AATGTTTCTGGAAAACCTTATATTGA 550287 |||| | | || ||||| ||| | | ||| || | || | | || |||| Sbjct 6688 TGATAAGGAACACTGGCCATTCAAGCTCGTTGAGAAGGACTC---ACAGCCAATGGTTGA 6632 Query 550288 AGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTT 550347 | | ||| || |||||||| ||||| || |||| ||||| ||||| || Sbjct 6631 GGTTCAAGTTGAGGGTGAGACCAAACAATTCACACCACAAGAAATCTCATCCATGGTATT 6572 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAA 550406 | || ||||| || ||| || ||||| |||| ||| | | | | || | Sbjct 6571 GACCAAGATGAAGGAAGTCGCCGAGGCCAA-GTTGGGTAAGACAGTCAAGAAGGTTGTCA 6513 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | || ||||||||||| || || ||| ||||| | | || || || ||||| ||| || Sbjct 6512 TTACAGTACCAGCATACTTCAACGACGCACAAAGAAACGCAACCAAGGATGCCGGAGTTA 6453 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 |||| ||| | | || || ||||| ||||| ||||| || || || || ||||||| | Sbjct 6452 TTGCCGGATTGGAAGTACTACGTATCATCAACGAACCAACAGCCGCAGCTATTGCATACG 6393 Query 550527 GACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 || | || || | ||| | || |||||| | ||||| |||| |||||| Sbjct 6392 GATTGGACAAGAAGGATGCCAAGGAGAAGAATGTATTGATCTTCGATTTGGGAGGT 6337 >seq132 Length=35544 Score = 140 bits (154), Expect = 3e-27 Identities = 391/596 (66%), Gaps = 8/596 (1%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| || || ||| | ||||| ||||| |||||||| ||| ||| || || | Sbjct 21139 AGCTATTGGAATTGATCTTGGAACAACATACTCTTGTGTTGCTGTATGGGAAGGTGAGAG 21080 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| ||||| |||||||| || ||||| ||| | || |||||||| ||||| | ||||| Sbjct 21079 AGTAGAAATCATTGCCAACGAGCAAGGAAACCGTACCACTCCATCATATGTCGCATTCAC 21020 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || | ||| || ||||| ||||| || || | || || | || || | || Sbjct 21019 AGACTCAGAAAGATTGGTTGGAGATGCCGCCAAGAACCAGTCCGCCATGAACCCAGCAAA 20960 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || | ||||| || || | || || |||||| | | | || | || |||| Sbjct 20959 CACCGTCTTTGACGCAAAGAGATTGATCGGAAGACGCTACGACGACCCACACGTCAAGGC 20900 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTT---AATGTTTCTGGAAAACCTTATATTGA 550287 |||| | | || ||||| ||| | | ||| || | || | | || |||| Sbjct 20899 TGATAAGGAACACTGGCCATTCAAGCTCGTTGAGAAGGACTC---ACAGCCAATGGTTGA 20843 Query 550288 AGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTT 550347 | | ||| || |||||||| ||||| || |||| ||||| ||||| || Sbjct 20842 GGTTCAAGTTGAGGGTGAGACCAAACAATTCACACCACAAGAAATCTCATCCATGGTATT 20783 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAA 550406 | || ||||| || ||| || ||||| |||| ||| | | | | || | Sbjct 20782 GACCAAGATGAAGGAAGTCGCCGAGGCCAA-GTTGGGTAAGACAGTCAAGAAGGTTGTCA 20724 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | || ||||||||||| || || ||| ||||| | | || || || ||||| ||| || Sbjct 20723 TTACAGTACCAGCATACTTCAACGACGCACAAAGAAACGCAACCAAGGATGCCGGAGTTA 20664 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 |||| ||| | | || || ||||| ||||| ||||| || || || || ||||||| | Sbjct 20663 TTGCCGGATTGGAAGTACTACGTATCATCAACGAACCAACAGCCGCAGCTATTGCATACG 20604 Query 550527 GACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 || | || || | ||| | || |||||| | ||||| |||| |||||| Sbjct 20603 GATTGGACAAGAAGGATGCCAAGGAGAAGAATGTATTGATCTTCGATTTGGGAGGT 20548 >seq492 Length=46864 Score = 102 bits (112), Expect = 7e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| ||||| | ||||| ||| ||||| || || || || | || |||| | Sbjct 26926 AGACGAAGTACCAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGAAAGGGTTCGT 26985 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||||||||| ||||| || || || || | ||| || || || ||||||||||| Sbjct 26986 CCATCTTCAAGTTGCTTTCCTGCGAAGATGAGACGTTGTTGGTCTGGTGGAATTCCTTCC 27045 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 ||||| ||||| || ||| || ||||| ||||| | | | ||||| ||| Sbjct 27046 TTATCCTGAATCTTGGCTTTGACGTTTTCAATGGTATCTGAGGGCTCGACCTCGAGTGTA 27105 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || || || || | |||||| |||||||| |||||| Sbjct 27106 ATTGTCTTGCCTGTCAAAGTTTTTACGAAAATCTGCATA 27144 Score = 98.7 bits (108), Expect = 8e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| ||||| | ||||| ||| ||||| || || || || | || |||| | Sbjct 27154 AGACGAAGTACCAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGAAAGGGTTCGT 27213 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||||||||| ||||| || || ||||| | ||| || || || ||||||||||| Sbjct 27214 CCATCTTCAAGTTGCTTTCCTGCGAAGATAAGACGTTGTTGGTCTGGTGGAATTCCTTCC 27273 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 ||||| ||||| || ||| || ||||| ||||| | | | ||||| ||| Sbjct 27274 TTATCCTGAATCTTGGCTTTGACGTTTTCAATGGTATCTGAGGGCTCGACCTCGAGTGTA 27333 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || || || || | ||||| || ||||| |||||| Sbjct 27334 ATTGTCTTGCCTGTCAAGGTTTTTACAAAAATCTGCATA 27372 Score = 93.3 bits (102), Expect = 3e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| ||||| | ||||| ||| ||||| || || || || | ||||||| | Sbjct 26698 AGACGAAGTACTAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGAAAGAGTTCGT 26757 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||||||||| ||||| || || || || | ||| || || || ||||| ||||| Sbjct 26758 CCATCTTCAAGTTGCTTTCCTGCGAAGATGAGACGTTGTTGGTCTGGTGGAATCCCTTCC 26817 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || || || ||||| || || ||||| ||||| | | | ||||| ||| Sbjct 26818 TTGTCCTGGATTTTAGCCTTGACGTTTTCAATGGTATCTGAGGGCTCGACCTCGAGTGTA 26877 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || || || || | |||||| |||||||| |||||| Sbjct 26878 ATTGTCTTGCCTGTCAAAGTTTTTACGAAAATCTGCATA 26916 >seq1068 Length=20344 Score = 98.7 bits (108), Expect = 8e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 550390 AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTAC 550449 ||| | | |||||||| | || || |||||||| || |||||||||||| | ||||| || Sbjct 6202 AGTAAAGAATGCAGTAGTTACAGTGCCAGCATACTTCAATGACTCACAAAGACAAGCAAC 6143 Query 550450 TAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGC 550509 || ||||| ||| ||||| ||||||||||| | | | ||||| || || || || Sbjct 6142 CAAGGATGCAGGATCAATTGCAGGACTTAATGTGTTGAGAGTAATCAACGAGCCAACAGC 6083 Query 550510 TGCTGCACTTGCATATGGACTTGATAA 550536 || ||| | ||||||||| | || || Sbjct 6082 AGCAGCATTGGCATATGGAGTAGACAA 6056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029192663667460