Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq492 111 1e-19 >seq492 Length=46864 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 ||||| ||||| ||||| ||||| || || || || || | | ||||| |||| || Sbjct 26707 ACTAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGAAAGAGTTCGTCCATCTTCA 26766 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | |||||| ||||| || || | ||| ||||| || || ||||| ||||| || || || Sbjct 26767 AGTTGCTTTCCTGCGAAGATGAGACGTTGTTGGTCTGGTGGAATCCCTTCCTTGTCCTGG 26826 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| || || |||| | || || || | || || || || || | || ||| Sbjct 26827 ATTTTAGCCTTGACGTTTTCAATGGTATCTGAGGGCTCGACCTCGAGTGTAATTGTCTTG 26886 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||||||||| || |||||||| Sbjct 26887 CCTGTCAAAGTTTTTACGAAAATCTGCAT 26915 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| ||||| ||||| || || || || || | | |||| |||| || Sbjct 26935 ACCAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGAAAGGGTTCGTCCATCTTCA 26994 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | |||||| ||||| || || | ||| ||||| || || ||||| ||||| ||||| ||| Sbjct 26995 AGTTGCTTTCCTGCGAAGATGAGACGTTGTTGGTCTGGTGGAATTCCTTCCTTATCCTGA 27054 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || ||| || |||| | || || || | || || || || || | || ||| Sbjct 27055 ATCTTGGCTTTGACGTTTTCAATGGTATCTGAGGGCTCGACCTCGAGTGTAATTGTCTTG 27114 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||||||||| || |||||||| Sbjct 27115 CCTGTCAAAGTTTTTACGAAAATCTGCAT 27143 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| ||||| ||||| || || || || || | | |||| |||| || Sbjct 27163 ACCAAGTGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGAAAGGGTTCGTCCATCTTCA 27222 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | |||||| ||||| || || | ||| ||||| || || ||||| ||||| ||||| ||| Sbjct 27223 AGTTGCTTTCCTGCGAAGATAAGACGTTGTTGGTCTGGTGGAATTCCTTCCTTATCCTGA 27282 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || ||| || |||| | || || || | || || || || || | || ||| Sbjct 27283 ATCTTGGCTTTGACGTTTTCAATGGTATCTGAGGGCTCGACCTCGAGTGTAATTGTCTTG 27342 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || ||||||||||| |||||||| Sbjct 27343 CCTGTCAAGGTTTTTACAAAAATCTGCAT 27371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396268962877578