Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1894 215 3e-51 seq732 215 3e-51 >seq1894 Length=33155 Score = 215 bits (238), Expect = 3e-51 Identities = 339/479 (71%), Gaps = 5/479 (1%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 || ||| || |||| | ||| || | |||| | |||| || ||| || | ||| || Sbjct 22533 ATGTGGGCAAAATAGAGACCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGGG 22592 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 |||||||||| |||| || ||||| | || | | ||||| || ||||||||||| || Sbjct 22593 AATCCACATTCCATAGAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATTCTTCTT 22652 Query 26008 TAGATCTAA-GAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTAC 26066 ||| |||| ||||||||| | ||||| ||||||||| || ||||| |||||||| || Sbjct 22653 CAGA-CTAAGGAAATCAAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCAC 22711 Query 26067 CTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACA 26126 || ||| || |||||| || || || ||||| ||||| | ||||| || || || Sbjct 22712 CTGGTCTCTTGTTTCCACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCA 22771 Query 26127 TTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186 |||| |||| |||| | || ||| ||||| | ||| | |||||||| | ||| | Sbjct 22772 TTGGTACTACTCCATTAGATGTTCCATTTGTTCCTGCAATGTAAGATCCTGTGGCTCTGA 22831 Query 26187 TATCGTGAGCA-TGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAA 26245 | | ||| || | ||| || |||||||| || ||||||| || ||||| | Sbjct 22832 TGTTGTGTACACTCAAT-CCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTT 22890 Query 26246 ACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGAT 26305 | |||||| | || || | |||||||||| | ||||| | | ||||| || || || Sbjct 22891 AGTGTATCATAGATACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAG 22950 Query 26306 AATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCC 26364 | ||| | | ||||||| || ||||||| ||| |||| ||||| ||| |||| || Sbjct 22951 AGTTGTGGCCGGTTTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTA-AATAGCC 23008 >seq732 Length=14862 Score = 215 bits (238), Expect = 3e-51 Identities = 339/479 (71%), Gaps = 5/479 (1%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 || ||| || |||| | ||| || | |||| | |||| || ||| || | ||| || Sbjct 9250 ATGTGGGCAAAATAGAGACCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGGG 9309 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 |||||||||| |||| || ||||| | || | | ||||| || ||||||||||| || Sbjct 9310 AATCCACATTCCATAGAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATTCTTCTT 9369 Query 26008 TAGATCTAA-GAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTAC 26066 ||| |||| ||||||||| | ||||| ||||||||| || ||||| |||||||| || Sbjct 9370 CAGA-CTAAGGAAATCAAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCAC 9428 Query 26067 CTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACA 26126 || ||| || |||||| || || || ||||| ||||| | ||||| || || || Sbjct 9429 CTGGTCTCTTGTTTCCACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCA 9488 Query 26127 TTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186 |||| |||| |||| | || ||| ||||| | ||| | |||||||| | ||| | Sbjct 9489 TTGGTACTACTCCATTAGATGTTCCATTTGTTCCTGCAATGTAAGATCCTGTGGCTCTGA 9548 Query 26187 TATCGTGAGCA-TGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAA 26245 | | ||| || | ||| || |||||||| || ||||||| || ||||| | Sbjct 9549 TGTTGTGTACACTCAAT-CCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTT 9607 Query 26246 ACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGAT 26305 | |||||| | || || | |||||||||| | ||||| | | ||||| || || || Sbjct 9608 AGTGTATCATAGATACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAG 9667 Query 26306 AATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCC 26364 | ||| | | ||||||| || ||||||| ||| |||| ||||| ||| |||| || Sbjct 9668 AGTTGTGGCCGGTTTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTA-AATAGCC 9725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253033974010550